Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110535219 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 8799540 ~ 8802257 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002475217.2 | False | 2418 | mRNA | 0.47 | 3 | 8799540 | 8802257 |
| XR_005034543.1 | False | 2154 | mRNA | 0.48 | 4 | 8799540 | 8802257 |
| TU1072548 | True | 305 | lncRNA | 0.47 | 1 | 8801931 | 8802235 |
8,798,000
8,799,000
8,800,000
8,801,000
8,802,000
8,803,000
8,804,000
8,805,000
8,806,000
8,807,000
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535213 | LOC106579667 | coding | upstream | 113884 | 8650438 ~ 8685656 (+) |
| LOC110536544 | LOC106590277 | coding | upstream | 302520 | 8379847 ~ 8497020 (+) |
| LOC118937462 | NA | coding | upstream | 461900 | 8294346 ~ 8337640 (+) |
| LOC110535212 | LOC106579665 | coding | upstream | 573502 | 8195607 ~ 8379328 (+) |
| LOC118937436 | NA | coding | upstream | 623755 | 8174793 ~ 8175785 (+) |
| LOC118937463 | NA | coding | downstream | 43308 | 8845565 ~ 8855476 (+) |
| LOC110535221 | LOC106579618 | coding | downstream | 54849 | 8857106 ~ 8860218 (+) |
| LOC100135908 | LOC100135908 | coding | downstream | 67319 | 8869576 ~ 8880714 (+) |
| LOC110535228 | LOC106579619 | coding | downstream | 87483 | 8889740 ~ 8933322 (+) |
| LOC118937299 | NA | coding | downstream | 118983 | 8921240 ~ 8925741 (+) |
| G940380 | NA | non-coding | upstream | 10627 | 8788498 ~ 8788913 (+) |
| G940379 | LOC100136486 | non-coding | upstream | 56416 | 8710911 ~ 8743124 (+) |
| G940402 | LOC106590268 | non-coding | upstream | 62818 | 8702436 ~ 8736722 (+) |
| G940376 | NA | non-coding | upstream | 146547 | 8651504 ~ 8652993 (+) |
| G940355 | NA | non-coding | upstream | 183964 | 8612814 ~ 8615576 (+) |
| G940437 | NA | non-coding | downstream | 973 | 8803230 ~ 8803555 (+) |
| G940461 | NA | non-coding | downstream | 35354 | 8837611 ~ 8837834 (+) |
| G940493 | NA | non-coding | downstream | 129614 | 8931871 ~ 8976279 (+) |
| G940520 | NA | non-coding | downstream | 227297 | 9029554 ~ 9106845 (+) |
| G940313 | NA | other | upstream | 258673 | 8532540 ~ 8540867 (+) |
| G940247 | NA | other | upstream | 359765 | 8439480 ~ 8439775 (+) |
| G941893 | NA | other | downstream | 1442852 | 10245109 ~ 10245506 (+) |
| G942702 | NA | other | downstream | 2308469 | 11110726 ~ 11111336 (+) |
| G944957 | NA | other | downstream | 4585293 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 5262291 | 14064548 ~ 14065869 (+) |
| G940102 | NA | other | upstream | 424003 | 8374506 ~ 8377928 (+) |
