LOC118937299


Basic Information

Item Value
gene id LOC118937299
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8921240 ~ 8925741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934776.1
TAGTGATTCAGGGGCCCGTTTCAAAATGCTGCTGACCTGTCCTACCCCGAGAAAGGGACATTAAATACAGTAGTATTCCTTTAAAATGGTTTCTCATACACATATTAGGAAGTATTTCACTGATGAGATGTGAGATATGCCACATGAATTTCATCACTTTAGTTTGTCAGACCACACTATGTGTGTGACAGTTTCTGCTGTAGACAGTTTACGTTACCGTCTAAGGCAAGTATCGACTTCTTCACTATATTTTCTGTTCATTTTAATGTTCAAAATAAATGAAAGGAGATTAATTCTGAGTAATGAGATTCAATATGTTCTAATGTACTGCTGTTTGTTCATGTATTAGCTTTACAACTGAAGGACATGGTGTATTTGATATGGGGATGGTTTAATGTGTTGTGTGAGTTAAGTTACTCCACCAGTAAGTGTATGTTTGTACTGTTTCAGGTGATCAGTAGTGTGTGAGTTCTCACATGGcttgttctgagaacatgttttttCTCATTGGCCTCTTTATGTCAGGTGTTTTGGCCTGTTTTGGTCAACGAAATTTGATCGCCACAATGCCAGATAGACTGGATGTACTGACGGGCTCCTGTGTGCAAATCCCATGTTCATTTGATATTCCTGACCATAAGTATACATTTAACAGCACCATACTAACCTCTGGAGTGTGGATTAAAGGAAAACCATACTTAGGTGGGCGTCCGGACAGAGTGATATTTAACAGTAGTAAGACGGTCAACAGATATCAAGGGAAGATAACTGGAAACATGTCCCAGAAGAACTGCACCACAGTCTTCTTCAATGTAACCACCAGTTACTCTGATAAATACTACTTAAGGATTGAGAGTCAACCATTCCTTGCAACAGATCCTGATAAGTCTGTTAATATAGTTGCCAGTGATTTGCCTTCCAGTCCCATCATTACTGTCTCAGGTGAGGTGAAGGAAGGGACCCCTGTCAGTTTGAACTGCTCTGCTGTCGCTCCCTGTCCCGAACAcccccctgagctgacatggaCTCTCCCAACACAGTTCACAACTGAGAACCAAATGCAAGAGAATTCAGACCAAACCAAATCAGTTCTCTCCACGGTGACCTTCACTCCGTCATACCTTCATCATGAGAAGAACATCACTTGTACTGCAGTCTACCCAGTAGGGACAAGCAACAAGACAGCTGAACATAACATGATGCTTAACGTTTCATGTAAGATTTAGTAACCGGTTCCTGAAGAATAGATCATTCTATCATGTTTTCACTGATGATTGTAATAGAGTGGTTTTGATGAGACTATTCAATATACCATAT

Function

NR:

description
myelin-associated glycoprotein-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934776.1 True 1317 mRNA 0.41 3 8921240 8925741

Neighbor

gene id symbol gene type direction distance location
LOC100135908 LOC100135908 coding upstream 40526 8869576 ~ 8880714 (+)
LOC110535221 LOC106579618 coding upstream 61022 8857106 ~ 8860218 (+)
LOC118937463 NA coding upstream 65764 8845565 ~ 8855476 (+)
LOC110535219 NA coding upstream 118983 8799540 ~ 8802257 (+)
LOC110535213 LOC106579667 coding upstream 235584 8650438 ~ 8685656 (+)
LOC110535229 LOC106579621 coding downstream 12614 8938355 ~ 8968485 (+)
LOC118937300 NA coding downstream 47179 8972920 ~ 8976404 (+)
LOC110535237 LOC106579624 coding downstream 353184 9278925 ~ 9296959 (+)
LOC118937475 NA coding downstream 364986 9290727 ~ 9290864 (+)
LOC100305285 pdcd6 coding downstream 393291 9319032 ~ 9329583 (+)
G940461 NA non-coding upstream 83406 8837611 ~ 8837834 (+)
G940437 NA non-coding upstream 117685 8803230 ~ 8803555 (+)
G940380 NA non-coding upstream 132327 8788498 ~ 8788913 (+)
G940379 LOC100136486 non-coding upstream 178116 8710911 ~ 8743124 (+)
G940493 NA non-coding downstream 6130 8931871 ~ 8976279 (+)
G940520 NA non-coding downstream 103813 9029554 ~ 9106845 (+)
G940515 NA non-coding downstream 121043 9046784 ~ 9242084 (+)
G940526 NA non-coding downstream 122864 9048605 ~ 9073783 (+)
G940527 NA non-coding downstream 123124 9048865 ~ 9100838 (+)
G940376 NA other upstream 268719 8651504 ~ 8652993 (+)
G940313 NA other upstream 380373 8532540 ~ 8540867 (+)
G940247 NA other upstream 481465 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 539660 8379847 ~ 8497020 (+)
G941893 NA other downstream 1319368 10245109 ~ 10245506 (+)
G942702 NA other downstream 2184985 11110726 ~ 11111336 (+)
G944957 NA other downstream 4461809 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 5138807 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 5229613 14154784 ~ 14202999 (+)

Expression


Co-expression Network