Item | Value |
---|---|
gene id | LOC110535272 |
gene name | LOC106579661 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048575.1 |
NCBI id | CM023229.2 |
chromosome length | 86280908 |
location | 11545457 ~ 11548240 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021620172.2 | True | 749 | mRNA | 0.53 | 4 | 11545457 | 11548240 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110535269 | LOC106579659 | coding | upstream | 3959 | 11499972 ~ 11541498 (+) |
LOC110535264 | LOC106579657 | coding | upstream | 47619 | 11178332 ~ 11497838 (+) |
trnaa-ugc-48 | NA | coding | upstream | 209872 | 11335510 ~ 11335585 (+) |
LOC110535263 | lrrc30 | coding | upstream | 387062 | 11155680 ~ 11158395 (+) |
LOC110535262 | LOC106579655 | coding | upstream | 480858 | 11025637 ~ 11064599 (+) |
LOC110535274 | LOC100136506 | coding | downstream | 249839 | 11798079 ~ 11885766 (+) |
LOC110535275 | NA | coding | downstream | 532023 | 12080263 ~ 12080894 (+) |
LOC110535276 | LOC106579583 | coding | downstream | 628673 | 12176913 ~ 12191408 (+) |
LOC110535277 | LOC106579584 | coding | downstream | 645165 | 12193405 ~ 12246357 (+) |
LOC110535283 | LOC106579606 | coding | downstream | 716825 | 12265065 ~ 12274786 (+) |
G943044 | NA | non-coding | upstream | 166986 | 11376506 ~ 11378471 (+) |
G943032 | NA | non-coding | upstream | 203023 | 11342090 ~ 11342434 (+) |
G942921 | NA | non-coding | upstream | 300999 | 11164136 ~ 11244458 (+) |
G942917 | NA | non-coding | upstream | 383929 | 11161299 ~ 11161528 (+) |
G943158 | NA | non-coding | downstream | 20553 | 11568793 ~ 11569048 (+) |
G943185 | NA | non-coding | downstream | 60996 | 11609236 ~ 11610212 (+) |
G943186 | NA | non-coding | downstream | 69517 | 11617757 ~ 11618092 (+) |
G943586 | NA | non-coding | downstream | 206453 | 11754693 ~ 11754932 (+) |
G943593 | NA | non-coding | downstream | 210613 | 11758853 ~ 11759228 (+) |
G942702 | NA | other | upstream | 434121 | 11110726 ~ 11111336 (+) |
G941893 | NA | other | upstream | 1299951 | 10245109 ~ 10245506 (+) |
LOC118937463 | NA | other | upstream | 2690020 | 8845565 ~ 8855476 (+) |
G940376 | NA | other | upstream | 2892936 | 8651504 ~ 8652993 (+) |
G940313 | NA | other | upstream | 3004590 | 8532540 ~ 8540867 (+) |
G944957 | NA | other | downstream | 1839310 | 13387550 ~ 13394875 (+) |
G946426 | ramp3 | other | downstream | 2516308 | 14064548 ~ 14065869 (+) |
LOC110535304 | NA | other | downstream | 2607114 | 14154784 ~ 14202999 (+) |
G946644 | NA | other | downstream | 2762335 | 14310575 ~ 14314318 (+) |
G946643 | NA | other | downstream | 2769768 | 14318008 ~ 14318623 (+) |