Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110535283 |
| gene name | LOC106579606 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 12265065 ~ 12274786 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110535283 |
| id | description |
|---|---|
| K20395 | CD300B_D_F; CO300B/D/F antigen |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021620187.2 | True | 2073 | mRNA | 0.45 | 7 | 12265065 | 12274786 |
12,264,000
12,266,000
12,268,000
12,270,000
12,272,000
12,274,000
12,276,000
12,278,000
12,280,000
12,282,000
12,284,000
12,286,000
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535277 | LOC106579584 | coding | upstream | 18708 | 12193405 ~ 12246357 (+) |
| LOC110535276 | LOC106579583 | coding | upstream | 73657 | 12176913 ~ 12191408 (+) |
| LOC110535275 | NA | coding | upstream | 184171 | 12080263 ~ 12080894 (+) |
| LOC110535274 | LOC100136506 | coding | upstream | 379299 | 11798079 ~ 11885766 (+) |
| LOC110535272 | LOC106579661 | coding | upstream | 716825 | 11545457 ~ 11548240 (+) |
| LOC110535281 | riok3 | coding | downstream | 496 | 12275282 ~ 12283258 (+) |
| rmc1 | mic1 | coding | downstream | 9095 | 12283881 ~ 12295047 (+) |
| LOC110535284 | LOC106579588 | coding | downstream | 95292 | 12370078 ~ 12384286 (+) |
| LOC110535285 | LOC106579590 | coding | downstream | 118587 | 12393373 ~ 12400089 (+) |
| LOC110536550 | LOC106579608 | coding | downstream | 489840 | 12764626 ~ 12794372 (+) |
| G943829 | NA | non-coding | upstream | 11746 | 12252246 ~ 12253319 (+) |
| G943827 | LOC106579585 | non-coding | upstream | 12868 | 12251980 ~ 12252197 (+) |
| G943820 | LOC106583515 | non-coding | upstream | 95619 | 12168999 ~ 12169446 (+) |
| G943817 | NA | non-coding | upstream | 100529 | 12164268 ~ 12164536 (+) |
| G943787 | NA | non-coding | upstream | 142450 | 12117079 ~ 12122615 (+) |
| G943877 | NA | non-coding | downstream | 44990 | 12319776 ~ 12343587 (+) |
| G944232 | NA | non-coding | downstream | 105664 | 12380450 ~ 12381622 (+) |
| G944423 | NA | non-coding | downstream | 351814 | 12626600 ~ 12626805 (+) |
| G944512 | NA | non-coding | downstream | 464085 | 12738871 ~ 12739358 (+) |
| G944513 | NA | non-coding | downstream | 465195 | 12739981 ~ 12740224 (+) |
| G942702 | NA | other | upstream | 1153729 | 11110726 ~ 11111336 (+) |
| G941893 | NA | other | upstream | 2019559 | 10245109 ~ 10245506 (+) |
| LOC118937463 | NA | other | upstream | 3409628 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 3612544 | 8651504 ~ 8652993 (+) |
| G940313 | NA | other | upstream | 3724198 | 8532540 ~ 8540867 (+) |
| G944957 | NA | other | downstream | 1112764 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 1789762 | 14064548 ~ 14065869 (+) |
| LOC110535304 | NA | other | downstream | 1880568 | 14154784 ~ 14202999 (+) |
| G946644 | NA | other | downstream | 2035789 | 14310575 ~ 14314318 (+) |
| G946643 | NA | other | downstream | 2043222 | 14318008 ~ 14318623 (+) |
