Gene
RNA
| Item | Value |
|---|---|
| gene id | ly86 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14308595 ~ 14315733 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| lymphocyte antigen 86 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021620223.2 | False | 1708 | mRNA | 0.39 | 5 | 14308595 | 14315733 |
| TU1079568 | False | 619 | lncRNA | 0.34 | 1 | 14308935 | 14309553 |
| TU1079569 | True | 751 | TUCP | 0.48 | 4 | 14312512 | 14315686 |
14,305,000
14,306,000
14,307,000
14,308,000
14,309,000
14,310,000
14,311,000
14,312,000
14,313,000
14,314,000
14,314,000
14,315,000
14,316,000
14,317,000
14,318,000
14,319,000
14,320,000
14,321,000
14,322,000
14,323,000
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535307 | rreb1 | coding | downstream | 10649 | 14226994 ~ 14297946 (-) |
| LOC110535302 | ramp3 | coding | downstream | 209617 | 14064503 ~ 14098978 (-) |
| LOC118937317 | LOC106590264 | coding | downstream | 298115 | 14001819 ~ 14010480 (-) |
| LOC118937437 | NA | coding | downstream | 378901 | 13927809 ~ 13929694 (-) |
| prkdc | prkdc | coding | downstream | 381134 | 13883898 ~ 13927461 (-) |
| LOC110535310 | LOC106579553 | coding | upstream | 45861 | 14361594 ~ 14372083 (-) |
| irf9 | irf9 | coding | upstream | 117779 | 14433512 ~ 14441499 (-) |
| LOC110536554 | LOC106579548 | coding | upstream | 125901 | 14441634 ~ 14456679 (-) |
| LOC110535319 | LOC106579521 | coding | upstream | 296963 | 14612696 ~ 14638003 (-) |
| sgk3 | LOC106579527 | coding | upstream | 358182 | 14673915 ~ 14696087 (-) |
| G946819 | NA | non-coding | downstream | 48265 | 14259961 ~ 14260330 (-) |
| G946818 | NA | non-coding | downstream | 48818 | 14259521 ~ 14259777 (-) |
| G946755 | NA | non-coding | downstream | 88115 | 14219144 ~ 14220480 (-) |
| G946757 | NA | non-coding | downstream | 101056 | 14205489 ~ 14207539 (-) |
| G946759 | NA | non-coding | downstream | 152573 | 14154921 ~ 14156022 (-) |
| G946842 | NA | non-coding | upstream | 94 | 14315827 ~ 14316036 (-) |
| G946843 | NA | non-coding | upstream | 1153 | 14316886 ~ 14317273 (-) |
| G946853 | NA | non-coding | upstream | 2279 | 14318012 ~ 14318630 (-) |
| G946845 | NA | non-coding | upstream | 12162 | 14327895 ~ 14332690 (-) |
| G946891 | NA | non-coding | upstream | 81037 | 14396770 ~ 14397070 (-) |
| G945345 | LOC105027308 | other | downstream | 1914457 | 12393397 ~ 12394138 (-) |
| LOC110536549 | LOC106579607 | other | downstream | 1949716 | 12348249 ~ 12366127 (-) |
| LOC110536548 | LOC106579654 | other | downstream | 3228078 | 11061866 ~ 11143146 (-) |
| G942483 | LOC106590343 | other | downstream | 3563918 | 10743314 ~ 10744677 (-) |
| G942454 | NA | other | downstream | 3665952 | 10639629 ~ 10642643 (-) |
| mtfr1 | LOC106579534 | other | upstream | 568602 | 14884317 ~ 14897579 (-) |
| G947750 | NA | other | upstream | 890698 | 15206431 ~ 15209597 (-) |
| G947894 | LOC106579543 | other | upstream | 1050217 | 15365950 ~ 15366301 (-) |
| pan3 | pan3 | other | upstream | 1135594 | 15439415 ~ 15455911 (-) |
| pdx1 | pdx1 | other | upstream | 1164935 | 15480498 ~ 15485495 (-) |
| ly86 | NA | other | upstream | 2959 | 14308595 ~ 14315733 (-) |
