crf (crf)


Basic Information

Item Value
gene id crf
gene name crf
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 14793195 ~ 14794694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124627.1
CAGGACACACAACGGCTCAACTTGAAGATTCCTGTTGATCCCCTGACATGAAGCTCAATTTACTTGTCACCACCGTGGTTCTGCTGCTTGCCTTCTTACCGCGCTATGAATGTAGGGCTGTCGAGAGCCCTGACGATGTCCAGCGCTCCACCGCTCCACAGCCCGACGCGCAGCAACAGTCTCTTCCCCTCCTGACGCGACTCGGAGAGGAATACTACATCCGACTGGGCAACGAGAACCGCAACTCTGCCGCGTCCGCACCGAAAGTCATGCACCCCAAGGGCTCCCCAGCGGTCTACAACAGAGCCTTGCAGCTCCAGCTGACGCAGCGCCTTCTACAAGGCAAAGTTGGGGACATCAATAGGTTCATCAGCGGCTTCGCGAACCAGCTCGACGACtcgatggagagggggaggaggtccgACGACCCGCCGATATCTCTAGATCTCACGTTCCACATGCTTCGACAGATGATGGAGATGTCCAGAGCGGAACAGTTACAGCAACAAGCCCATAGCAACAGAAAAATGATGGAGATCTTCGGGAAATGAAAACTGCATCAATCCATCCGCCAAAGATTTGTTTTTACGTTTAGCTCAAAACACAATTATCTATACCATAGTGCTGCTTTTCCATCTTTGTTtataatgatttattttataGCTTTAACTTCCAACGATGGAGACTAAATGGGCTTGTACATGACTTGTGTAATTCTCAGATTGTAGCCTGTATCATGCAAGATAAACTATGTCCTGTTAATTTATATTAGGCTACTGTTGTTAAAGTGCTCAATCCAAACTGTAGCATATACAAGTTTCTTTCTTTAAGATATGAACATATTTTTTTGGTAGACCTTATAGGCTTAGGAAGTTAAGTTTTATTGTATGTTATGTTATTTAAGTTTGTTAATAAACTTATGAGCAACCAGTCCATTTTTTTTTGTGCAAGAGAATgtcttatatttatatttttcaataaAATCTGAAAAGTT

Function

NR:

description
corticotropin-releasing factor isoform 2 precursor

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05256 CRH; corticotropin-releasing hormone

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124627.1 True 994 mRNA 0.44 2 14793195 14794694

Neighbor

gene id symbol gene type direction distance location
LOC110535322 LOC106579526 coding upstream 77772 14665667 ~ 14715423 (+)
LOC110535321 LOC106579524 coding upstream 129635 14660285 ~ 14663560 (+)
ppp1r42 ppp1r42 coding upstream 133756 14645642 ~ 14659439 (+)
csn5 csn5 coding upstream 150571 14638259 ~ 14642624 (+)
LOC110535318 LOC106579520 coding upstream 180620 14515936 ~ 14612575 (+)
trnay-gua-3 NA coding downstream 36082 14830776 ~ 14830861 (+)
LOC110535327 LOC106579529 coding downstream 45959 14840653 ~ 14882192 (+)
LOC110535331 LOC106579535 coding downstream 110734 14905428 ~ 14918163 (+)
LOC118937318 NA coding downstream 203185 14997879 ~ 15016727 (+)
abhd10b abhd10 coding downstream 474918 15269612 ~ 15277101 (+)
G947254 NA non-coding upstream 16159 14774003 ~ 14777036 (+)
G947252 NA non-coding upstream 19353 14773369 ~ 14773842 (+)
G947207 NA non-coding upstream 50635 14742351 ~ 14742560 (+)
G947059 NA non-coding upstream 71025 14721966 ~ 14722170 (+)
G947057 NA non-coding upstream 74512 14718448 ~ 14718683 (+)
G947278 NA non-coding downstream 1749 14796443 ~ 14796731 (+)
G947283 NA non-coding downstream 13768 14808462 ~ 14808661 (+)
G947286 NA non-coding downstream 17637 14812331 ~ 14812543 (+)
G947302 NA non-coding downstream 94934 14889628 ~ 14890465 (+)
G947338 NA non-coding downstream 105959 14900653 ~ 14900869 (+)
G946999 NA other upstream 209146 14582543 ~ 14584049 (+)
G946692 NA other upstream 391551 14401254 ~ 14401644 (+)
G946690 NA other upstream 392922 14399862 ~ 14400273 (+)
G946642 LOC106590417 other upstream 463859 14318665 ~ 14329336 (+)
G947301 LOC106590396 other downstream 91920 14886614 ~ 14887282 (+)
spata13 LOC106579541 other downstream 490485 15285042 ~ 15320246 (+)
LOC110535338 LOC106579503 other downstream 642987 15375660 ~ 15478222 (+)
rnf6 LOC106579512 other downstream 793136 15587284 ~ 15593900 (+)
atp8a2 LOC106579514 other downstream 857280 15594416 ~ 15660363 (+)

Expression


Co-expression Network