LOC118937468


Basic Information

Item Value
gene id LOC118937468
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 15219006 ~ 15221030 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936642.1
ATGCCTGTAACCCTGCAATTACTGTGTACAAGCCCCACGCCCTCACTCCCCAGCTCCACATCTCCACATCACCCCAGCTCCACATCTCCCCATCTCCACATCTCCCCAGCTCCACATCTCCACATCACCCCAGCTCCACATCTCCACATCTCCCCAGCTCCACATCTCCCCATCTCCACATCTCCCCAGCTCCACATCTCCACATCACCCCAGCTCCACATCTCCACATCTCCCCAGCTCCACATCTCCCCATCTCCACATCTCCGCAGCTCCACATCTCCCCAGCTCTACATCTCCCCATCTCCACATCTCCCCAGCTCCACATCTCCCCATCTCCACATCTCCCAAGCTCCACAGCCCCACGCCCTCACTCCCCAGCTCCACATCTCCCCAGCTCCACAGCTCCACGCCCTCGCTCCCCAGCTCCACATCTCCCCAGCTCCACGCCCTCACTCCCCAGCTCCACATCTCCCCAGCTCCACAGCTCCACGCCCTCGCTCCCCAGCTCCACATCTCCCCAGCTCCATGCCCTCACTCCCCAGCTCCACATCTCCCCAGCTCCACAGCTCCACGCCCTCGCTCCCCAGCTCCACATCTCCCCATCTCCAAATCTCCACATCTCCACAGCCCCACGCCCTCACTCCCCAGCTCCACATCTCCACAGCTCCCCAGCTCCACACCCTCACTCCCCAGCTCCCCATTACCTCAGGTCCACAGCCCCACGCCCTCACTCCCCAGCTCCACATCTCCCCAGCTCCACAGCCCCACGCCCTCACACCCCAGCTCAACATCTCCCCAGTTCCACAGCCCCACGCCCTCACTCCCCAGCTCCACATCTCCCCAGCTCCACAGCCCCACGCCCTCACTCCCCAGCTCCACATCCCCCCAGCTCCACAGCCCCACACCCTCgctccccatctccccatctccccagCTCCCCATCTCCCCAGCTCCCCATCTCCCCAGCTCCCCATCTCCACAGCTCCCCATCTCCACAGCTCCCAATCTCCACAGCTCCCCAGCTCCCCAGCTCCTAATCTCCACAGCTCCCCAACTTCAAAGCTCACCAGCTCCCCATTTCCGCATCTCTCCAGGTCCCAATGTCCCCATTTCGCCAGCTCCCCAGCTCCCCATTTCCCCATTTCCCCATCTCCCCAGGTCCCCAGCTCCCCATCTCCTCAGCTTCCCAGCTCCCATCTCCACAGCTCCACGGCTCCACAGCTCCACAGCTCCCCATCTTCTCATCTCCCCAGCTCCACAGCTCCACAGCTCCACAGCTCCACAGCTCCCCATCTCCACAGCTCCCCAGCTCCCCATCTCCCCAGCTCCACAGCTCCACAGCTCCACATCTCCACAGCTCCCGAGCTCCACAGCTCCCCATCTCCACAGCTCCCCAGCTCCCCAGCTCCACAGCTCCACAGCTCCCCATCTCCACAGCTCCACAGTTCCCCAGCTCCACAGCTCCACAGTTCCACAGCTCCCCATCTCCAAAGCTCCCCATCTCTCCAGCTCCCCATCTCCACATCTTCACAGCTCCACAGTTCCCCAGCTCCACAGCTCCACAGCTCCCCAGCTCCACAGCTCCACAGTTCCCCAGCTCCACAGCTCCACAGCTCCACAGTTCCACAGCTCCACAGCTCCACAGTTCCACAGCCACAGCACCACAGCTCCACAGCTCCCCATCTCCCCAGCTCCACAGCTCCCCATCTCCCCAGCTCCCCATCTCCCCAGCTCCCCATCTCCACAGCTCCACAGTTACCCAGCTCCCCATCTCCCCAGCTCCATAGCTCCCCATCTCCACAGCTCCACAGCTCCACATCTCCACAGCTCCCCATCTCCACAGCTCCACAGCTCCACATCTCCACAGCTCCCCATCTCCACAGCTCCACAGCTCCACAGCTCCACATCTCCACAGCTCCCCATCTCCACAGCTCCACAGCTCTACAGCCTCCCAGCTCCACAGAGAAGGTGATGATTGCGGGAGCTAGCGGTGGAACTGTTATTTGTCAGATGAATTTGAATTGA

Function

NR:

description
Ice nucleation protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936642.1 True 2025 mRNA 0.62 1 15219006 15221030
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110535332 LOC106579536 coding downstream 136239 15080524 ~ 15082767 (-)
mtfr1 LOC106579534 coding downstream 321427 14884317 ~ 14897579 (-)
LOC110535328 dnjc5 coding downstream 378347 14830974 ~ 14840659 (-)
LOC110535326 NA coding downstream 393407 14815506 ~ 14825629 (-)
LOC110536555 NA coding downstream 408031 14797797 ~ 14810975 (-)
LOC110535333 LOC106590438 coding upstream 30241 15251271 ~ 15268657 (-)
pan3 pan3 coding upstream 218385 15439415 ~ 15455911 (-)
pdx1 pdx1 coding upstream 259468 15480498 ~ 15485495 (-)
si:ch211-140b10.6 polr1d coding upstream 270807 15491837 ~ 15497193 (-)
rpl21 rpl21 coding upstream 305407 15526437 ~ 15530037 (-)
G947754 NA non-coding downstream 607 15218139 ~ 15218399 (-)
G947752 NA non-coding downstream 4880 15213857 ~ 15214126 (-)
G947746 NA non-coding downstream 14873 15203553 ~ 15204133 (-)
G947735 NA non-coding downstream 25085 15193413 ~ 15193921 (-)
G947727 NA non-coding downstream 40766 15177990 ~ 15178240 (-)
G947825 NA non-coding upstream 11692 15232722 ~ 15232974 (-)
G947827 NA non-coding upstream 13423 15234453 ~ 15234675 (-)
G947829 NA non-coding upstream 16545 15237575 ~ 15237905 (-)
G947832 NA non-coding upstream 20921 15241951 ~ 15242283 (-)
G947834 NA non-coding upstream 24469 15245499 ~ 15245709 (-)
G947750 NA other downstream 9409 15206431 ~ 15209597 (-)
ly86 NA other downstream 903320 14308595 ~ 14315733 (-)
G945345 LOC105027308 other downstream 2824868 12393397 ~ 12394138 (-)
LOC110536549 LOC106579607 other downstream 2860127 12348249 ~ 12366127 (-)
G947894 LOC106579543 other upstream 144920 15365950 ~ 15366301 (-)
LOC110535357 LOC106579444 other upstream 579745 15800721 ~ 15810494 (-)
LOC110536560 LOC106579448 other upstream 653299 15873634 ~ 15899014 (-)

Expression

LOC118937468 Expression in all Baseline Samples

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LOC118937468 Expression in each Bioproject

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LOC118937468 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 0.4.
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Co-expression Network