urad (urad)


Basic Information

Item Value
gene id urad
gene name urad
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 15478585 ~ 15479868 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021620280.2
TTCTGTTGACCTGTCCAAAGGGCAGTTTTGGGGCCGCTACTAATGAGTCTGTGCAGACGAGACAGTAGAGTTTAATATGGACATCGGATCAGTGAATTATCTCCCTTATGAGGAATTTGTGGATGTTTTCGGTAACGTGGTGGAGAAATGTCCACTCATAACGGCCGCAGTATGGTCCCGCCGTCCCTTCTCGAGCCTTGCTGACCTGGAGGCCAGTATAAATGACTTCATCGATGCCCTCACCGAATCAGGTAAAGAGGGAATCCTCAGAGTTCACCCCGACCTCACGGGTAGAGACCTCCAGAGTGGGACTCTGACCCGGGAGTCGCGAGAGGAACAGGTCCAGGCCGGTTTGGACACGCTGACCACCGCGGAGGTCTCTCGCATGGCCCGGCTGAATACGGAATACAAGGACCACTTCGGTTTCCCCTTCGTGATCTGCGCGCGGATGAACAACAAGGCGACCATCCTGCGGCAGCTAGAGGAGCGGCTCCGGAACGAGCGCACCATTGAGAGGGCGTGCGCCATCGATGAAGTGAAGAAGATCTGTCACCTCCGTCTGCAGGGGCTCGTGGTCCCGGAGACGTCCAACAAGCTATAACTGACTGACGGGATGACATACAGTTTCGTGTGGTCTACCTGATGAGTTGTATGTGTTTGAATAGTGCATCATAATGGCTGCGTCATTGTTGTGCGTAAAGGAGTAACTGTGCCTAAATGTGCTTAATTGTACCAAGTGCCAAAATTGAGCAAAAGTAATTAAATAACTGCAGATGTTTCATTGATTTTATTCTGATTTCAAATATGAACTTTCATTTGATAAGTCTGAGATGATAGCTTAATTAATAAAGATTTCAAAATATAGTA

Function

symbol description
urad Enables 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity. Predicted to be involved in urate catabolic process. Predicted to act upstream of or within allantoin biosynthetic process and purine nucleobase metabolic process. Predicted to be located in peroxisome. Orthologous to human URAD (ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase).

NR:

description
PREDICTED: putative 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase

GO: NA

KEGG:

id description
K13485 PRHOXNB, URAD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021620280.2 True 867 mRNA 0.49 2 15478585 15479868

Neighbor

gene id symbol gene type direction distance location
LOC110535338 LOC106579503 coding upstream 363 15375660 ~ 15478222 (+)
LOC110536557 LOC106579543 coding upstream 111042 15342361 ~ 15367543 (+)
tmprss7 tmprss7 coding upstream 141395 15320582 ~ 15337190 (+)
spata13 LOC106579541 coding upstream 158339 15285042 ~ 15320246 (+)
LOC110536556 LOC106590436 coding upstream 194161 15283295 ~ 15284424 (+)
lnx2a lnx2 coding downstream 17593 15497461 ~ 15518161 (+)
usp12a usp12 coding downstream 50307 15530175 ~ 15534688 (+)
LOC110535348 LOC106579510 coding downstream 59810 15539678 ~ 15547074 (+)
rnf6 LOC106579512 coding downstream 107416 15587284 ~ 15593900 (+)
atp8a2 LOC106579514 coding downstream 114548 15594416 ~ 15660363 (+)
G947956 NA non-coding upstream 40967 15436326 ~ 15437618 (+)
G947952 NA non-coding upstream 47705 15430587 ~ 15430880 (+)
G947951 NA non-coding upstream 50201 15427930 ~ 15428384 (+)
G947898 NA non-coding upstream 109187 15368920 ~ 15369398 (+)
G947896 NA non-coding upstream 109937 15368279 ~ 15368648 (+)
G947984 NA non-coding downstream 10420 15490288 ~ 15490511 (+)
G947980 NA non-coding downstream 11239 15491107 ~ 15491630 (+)
G947999 NA non-coding downstream 38624 15518492 ~ 15518714 (+)
G948000 NA non-coding downstream 40596 15520464 ~ 15520678 (+)
G948005 rpl21 non-coding downstream 46569 15526437 ~ 15529942 (+)
G947301 LOC106590396 other upstream 591303 14886614 ~ 14887282 (+)
LOC110535322 LOC106579526 other upstream 808829 14665667 ~ 14715423 (+)
G946999 NA other upstream 894536 14582543 ~ 14584049 (+)
boc LOC106579445 other downstream 267505 15747150 ~ 15800515 (+)
G948524 NA other downstream 574197 16054065 ~ 16054638 (+)
sh3kbp1 LOC106579452 other downstream 593548 16073315 ~ 16098499 (+)

Expression


Co-expression Network