zdhhc23b (zdhhc23)


Basic Information

Item Value
gene id zdhhc23b
gene name zdhhc23
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 15858519 ~ 15865400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021620314.2
ACGGACTCCGCCACTCTCCACAGTACAGGCAGTCGTGTTGCCGCCTACTGACCAGACAACCTCAGCGACAGAGGAGGTGTAGGCTATATGTGGACTTCTGTCTGCTCTTCATTCATACATACCATTGGAAAATACTATCTGTTGAATGGAGTGACTATAGGGTTCCAGCGCTTTCCACAGTAGCCTCTATAGCGTGCGGTCTGGGATTGGAATGACTAAAACATCAGAAGGGAGACGAAACAGCCTACATACCTTGTTGGATTAACAACATTAATAGACTAAACTTGCAACAGGACAGTCGGGCAGGAGACTGAAAACATTCcaggctgactggctgtctgtcATGAAGAAGCGAGCCAATGAGGTGTTGGAGCCGGATGAGCCTCTGTGCTGCTGTGAGTTTGTGGACCGTCAGGGGGGGCGGAGCCATGTGGCAGCCTGCTGCTGTGACTGTGAGGATCTGGACGATGCCTGTGACAGatGGCTGAAGAAAGAGCCCCAGAAGGCAGATTCACTGTCCCGTCTGGTTACCATGGTGAGCGACCGCCTCCGTGTTCCCTGGTTCTGGGGCGGAGCCCGGCGTGTTGATCTATCGGTGCTGCCCCCGCTGCTCCTACTTCCTGTCCTCCTACACATCGCAGCCCTTCACTTCCTGTTGGGCATGGTGGTTCTGACTGCTCTACCGGTACTGGTTCTATGGTACTACTACGTCACCCACCGTAAGAAGGGCCGGACTCTGTTCTTCCTCAGCCTGGCCCTGTTCTCCCTGGGCTACATGTACTACCTCTTCCTCACCGAGGTCTTCCCCAGGGGGGGTGTAGGGCTGACCCAGCTGGGTACAGTGACCCTGGGGGTGGCCCTCACTCTGGCCTCACTCATCCACACCAAGAGAGAGCCCGGCTACGTACGGCCTCACACGGCCGACATCCACAGCACGGTAACCTATCACAGCTCACCTCCGGACAGAGACCCCGCCCACACCAGCCTCAACGGGGTTGGGCAGGAAGTAGTGCTAGCCAATCGGGGGAGTGGGTCGGAGCAGCAGGGCCAAGgggtggagcagagggagagtgGGCGGAGCAGGAAGTGGTGCTCTCTGTGCAGGGTGGTGCGGCCCCCCAGAGCGGGACACTGCAGGATCTGTGGTGTCTGTGTCCTGAGGCTGGACCACCACTGTGTCTGGATAAACAGTTGTGTGGGCCAGGCCAATCACTGCAGCTTCCTGTCGACACTCCTCCTCTTTCTGTTGACCTCTCTGTATGGAATCAGTCTGGTGCTGCGCAGCGTGTGTCCCCAACAGAACCTGCTCAGCGCCCTGCTCTACTGCCCAGGCGTCTACAATCAGTACAGcTCGGCACTGTGTTTCACCTGTGCGTGGTACAGCAGCATAGTGACGGGTGGCCTGCTACACCTTCTGGTCCTGCAGCTCATCAACGTCAGCTACAACGTGACGGAGCGAGAGGTGTGCACCGCCCTCCGAGACAAGACCGCCCGCAGCCACTACTGGGGCCTCGTCGTAGACACAGGAGTCTACTCACATGGTTTCCGTGGCAACTGGGCAGAGTTCCTGACAATGGGAGAAGGCCTGCACACACCCTCACCCAGTCTCACTGACTTGGTGTAGCTGAGCTGCTCATCATCGTCATTACATCTTTAGAAGTGATTGATCAAATTGGACGATCCAGGTAGAAGTTGCCCACAGAAACAGATCTAGGATAATTTTACCCTcataccacaggaggctgctgaggggagggcggctcataataatggctgtaacggtgcaaatggaatggcatcaaacacgtggaaaccatgtgtttgatgtatttgataccattccactaatgcTGCTCCATCCATTACGACGAGCCCGTCctctccaattaaggtgccaccaacctcctgtgcctcAAAGAATCCTGACTTGAACCGTTAGGGGGAAGAACACAAGACAGACCTTGGGTCAGTGTCTATGGGTAACTTCACCCTCTGTGATATGGGCTAGAGTTGAAGGATGCATCTGATGTACTGTCTTTCACCAACAGATGGCAGCATATCTCCACACCTCAGACTTCTGACTGCCATCACCTTCTCTCCCCAGTTGTcccaaatatgtatatatacactagataACTGACAGGAGGCACTGTATTGAAgcacctccatcttggcactgcCCCAccgttgtaaaaaatattttggaaactatagaaatgcatttaccAAATGTCTACATTAGTGTTTGCAACGTTTATTCTgtcacagacaccttaatgcagcgtttcccaaactcagtcatCAGGAACCCAACgtgtgcatgttttggtttttgccctaacactacacagctgattcaaatgatcaaagcttgatgattagttgagtatttgaatcagctgtgtaatgctacggcaaaaaacaaaatgtgcaccccttagGATCCCGATGACCAAGTTTGGGGAAACCCTGCTAataaattacactgaacaaaaacgcaacatgtaaagtgttggtcccatgtttcatgagttgaaataaaaaaatcccagacattttccaaacGCA
>XM_021620315.2
ACGGACTCCGCCACTCTCCACAGTACAGGCAGTCGTGTTGCCGCCTACTGACCAGACAACCTCAGCGACAGAGGAGGTGTAGGCTATATGTGGACTTCTGTCTGCTCTTCATTCATACATACCATTGGAAAATACTATCTGTTGAATGGAGTGACTATAGGGTTCCAGCGCTTTCCACAGTAGCCTCTATAGCGTGCGGTCTGGGATTGGAATGACTAAAACATCAGAAGGGAGACGAAACAGCCTACATACCTTGTTGGATTAACAACATTAATAGACTAAACTTGCAACAGGACAGTCGGGCAGGAGACTGAAAACATTCcaggctgactggctgtctgtcATGAAGAAGCGAGCCAATGAGGTGTTGGAGCCGGATGAGCCTCTGTGCTGCTGTGAGTTTGTGGACCGTCAGGGGGGGCGGAGCCATGTGGCAGCCTGCTGCTGTGACTGTGAGGATCTGGACGATGCCTGTGACAGatGGCTGAAGAAAGAGCCCCAGAAGGCAGATTCACTGTCCCGTCTGGTTACCATGGTGAGCGACCGCCTCCGTGTTCCCTGGTTCTGGGGCGGAGCCCGGCGTGTTGATCTATCGGTGCTGCCCCCGCTGCTCCTACTTCCTGTCCTCCTACACATCGCAGCCCTTCACTTCCTGTTGGGCATGGTGGTTCTGACTGCTCTACCGGTACTGGTTCTATGGTACTACTACGTCACCCACCGTAAGAAGGGCCGGACTCTGTTCTTCCTCAGCCTGGCCCTGTTCTCCCTGGGCTACATGTACTACCTCTTCCTCACCGAGGTCTTCCCCAGGGGGGGTGTAGGGCTGACCCAGCTGGGTACAGTGACCCTGGGGGTGGCCCTCACTCTGGCCTCACTCATCCACACCAAGAGAGAGCCCGGCTACGTACGGCCTCACACGGCCGACATCCACAGCACGGATAAACAGTTGTGTGGGCCAGGCCAATCACTGCAGCTTCCTGTCGACACTCCTCCTCTTTCTGTTGACCTCTCTGTATGGAATCAGTCTGGTGCTGCGCAGCGTGTGTCCCCAACAGAACCTGCTCAGCGCCCTGCTCTACTGCCCAGGCGTCTACAATCAGTACAGcTCGGCACTGTGTTTCACCTGTGCGTGGTACAGCAGCATAGTGACGGGTGGCCTGCTACACCTTCTGGTCCTGCAGCTCATCAACGTCAGCTACAACGTGACGGAGCGAGAGGTGTGCACCGCCCTCCGAGACAAGACCGCCCGCAGCCACTACTGGGGCCTCGTCGTAGACACAGGAGTCTACTCACATGGTTTCCGTGGCAACTGGGCAGAGTTCCTGACAATGGGAGAAGGCCTGCACACACCCTCACCCAGTCTCACTGACTTGGTGTAGCTGAGCTGCTCATCATCGTCATTACATCTTTAGAAGTGATTGATCAAATTGGACGATCCAGGTAGAAGTTGCCCACAGAAACAGATCTAGGATAATTTTACCCTcataccacaggaggctgctgaggggagggcggctcataataatggctgtaacggtgcaaatggaatggcatcaaacacgtggaaaccatgtgtttgatgtatttgataccattccactaatgcTGCTCCATCCATTACGACGAGCCCGTCctctccaattaaggtgccaccaacctcctgtgcctcAAAGAATCCTGACTTGAACCGTTAGGGGGAAGAACACAAGACAGACCTTGGGTCAGTGTCTATGGGTAACTTCACCCTCTGTGATATGGGCTAGAGTTGAAGGATGCATCTGATGTACTGTCTTTCACCAACAGATGGCAGCATATCTCCACACCTCAGACTTCTGACTGCCATCACCTTCTCTCCCCAGTTGTcccaaatatgtatatatacactagataACTGACAGGAGGCACTGTATTGAAgcacctccatcttggcactgcCCCAccgttgtaaaaaatattttggaaactatagaaatgcatttaccAAATGTCTACATTAGTGTTTGCAACGTTTATTCTgtcacagacaccttaatgcagcgtttcccaaactcagtcatCAGGAACCCAACgtgtgcatgttttggtttttgccctaacactacacagctgattcaaatgatcaaagcttgatgattagttgagtatttgaatcagctgtgtaatgctacggcaaaaaacaaaatgtgcaccccttagGATCCCGATGACCAAGTTTGGGGAAACCCTGCTAataaattacactgaacaaaaacgcaacatgtaaagtgttggtcccatgtttcatgagttgaaataaaaaaatcccagacattttccaaacGCA

Function

symbol description
zdhhc23 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Involved in protein localization to plasma membrane and protein palmitoylation. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum.

NR:

description
palmitoyltransferase ZDHHC23-like isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021620314.2 False 2568 mRNA 0.52 5 15858519 15865400
XM_021620315.2 True 2323 mRNA 0.51 5 15858519 15865400

Neighbor

gene id symbol gene type direction distance location
gramd1c LOC106579449 coding upstream 754 15841848 ~ 15857765 (+)
atp6v1ab LOC106579446 coding upstream 18735 15817375 ~ 15839784 (+)
boc LOC106579445 coding upstream 58004 15747150 ~ 15800515 (+)
spice1 spice1 coding upstream 163405 15688260 ~ 15695114 (+)
atp8a2 LOC106579514 coding upstream 199582 15594416 ~ 15660363 (+)
sh3kbp1 LOC106579452 coding downstream 207915 16073315 ~ 16098499 (+)
map3k15 map3k15 coding downstream 233205 16098605 ~ 16205054 (+)
ccl20b LOC100135878 coding downstream 344591 16209929 ~ 16211192 (+)
tfr1b LOC106579454 coding downstream 376181 16241581 ~ 16253322 (+)
tnk2a LOC106579455 coding downstream 388609 16254009 ~ 16274994 (+)
G948318 NA non-coding upstream 30299 15827298 ~ 15828220 (+)
G948115 NA non-coding upstream 77176 15778985 ~ 15781343 (+)
G948116 NA non-coding upstream 78222 15779633 ~ 15780297 (+)
G948092 NA non-coding upstream 129625 15728690 ~ 15728894 (+)
G948049 LOC106579518 non-coding upstream 158881 15695190 ~ 15699638 (+)
G948347 NA non-coding downstream 29044 15894444 ~ 15894934 (+)
G948410 LOC100194703 non-coding downstream 54685 15920085 ~ 15920430 (+)
G948413 LOC100136012 non-coding downstream 57159 15922559 ~ 15922830 (+)
G948426 NA non-coding downstream 67792 15933192 ~ 15933423 (+)
G948448 NA non-coding downstream 86450 15951850 ~ 15952070 (+)
rnf6 LOC106579512 other upstream 268743 15587284 ~ 15593900 (+)
LOC110535338 LOC106579503 other upstream 418657 15375660 ~ 15478222 (+)
spata13 LOC106579541 other upstream 559146 15285042 ~ 15320246 (+)
G948524 NA other downstream 188665 16054065 ~ 16054638 (+)
G948587 NA other downstream 457950 16323350 ~ 16326407 (+)
LOC110535372 mynn other downstream 467657 16327393 ~ 16338373 (+)

Expression


Co-expression Network