Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110536560 |
| gene name | LOC106579448 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15873634 ~ 15899014 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| coiled-coil domain-containing protein 191-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036936645.1 | False | 3132 | mRNA | 0.53 | 16 | 15873634 | 15898227 |
| TU1081428 | False | 752 | TUCP | 0.50 | 3 | 15874329 | 15876494 |
| TU1081437 | False | 289 | lncRNA | 0.59 | 2 | 15896824 | 15897319 |
| TU1081438 | True | 330 | TUCP | 0.46 | 4 | 15897452 | 15899014 |
15,868,000
15,872,000
15,876,000
15,880,000
15,884,000
15,888,000
15,892,000
15,896,000
15,900,000
15,904,000
15,908,000
15,912,000
15,916,000
15,920,000
15,924,000
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| naa50 | LOC106579447 | coding | downstream | 56711 | 15812225 ~ 15816923 (-) |
| LOC110535357 | LOC106579444 | coding | downstream | 63140 | 15800721 ~ 15810494 (-) |
| LOC110535356 | LOC106579518 | coding | downstream | 172183 | 15696797 ~ 15701451 (-) |
| LOC110535353 | LOC106579515 | coding | downstream | 186565 | 15671827 ~ 15687069 (-) |
| cdk8 | cdk8 | coding | downstream | 284581 | 15571273 ~ 15589053 (-) |
| drd3 | LOC106579486 | coding | upstream | 90355 | 15988295 ~ 16040205 (-) |
| and1 | LOC106579456 | coding | upstream | 398082 | 16296309 ~ 16302789 (-) |
| cops9 | NA | coding | upstream | 404705 | 16302932 ~ 16308724 (-) |
| otos | LOC106579496 | coding | upstream | 414701 | 16312928 ~ 16314905 (-) |
| lrrc31 | lrrc31 | coding | upstream | 462973 | 16361200 ~ 16368132 (-) |
| G948361 | LOC106579446 | non-coding | downstream | 33852 | 15817355 ~ 15839782 (-) |
| G948302 | NA | non-coding | downstream | 86373 | 15786910 ~ 15787261 (-) |
| G948297 | NA | non-coding | downstream | 96186 | 15776154 ~ 15777448 (-) |
| G948295 | NA | non-coding | downstream | 100900 | 15771744 ~ 15772734 (-) |
| G948282 | NA | non-coding | downstream | 103919 | 15747353 ~ 15769715 (-) |
| G948414 | NA | non-coding | upstream | 24331 | 15922558 ~ 15922789 (-) |
| G948434 | NA | non-coding | upstream | 40564 | 15938791 ~ 15939018 (-) |
| G948447 | NA | non-coding | upstream | 52914 | 15951141 ~ 15951391 (-) |
| G948473 | NA | non-coding | upstream | 70277 | 15968504 ~ 15968760 (-) |
| G948481 | LOC106607612 | non-coding | upstream | 81842 | 15980069 ~ 15980332 (-) |
| pdx1 | pdx1 | other | downstream | 388394 | 15480498 ~ 15485495 (-) |
| pan3 | pan3 | other | downstream | 417890 | 15439415 ~ 15455911 (-) |
| G947894 | LOC106579543 | other | downstream | 507333 | 15365950 ~ 15366301 (-) |
| G947750 | NA | other | downstream | 664037 | 15206431 ~ 15209597 (-) |
| G949329 | NA | other | upstream | 151756 | 16049983 ~ 16050305 (-) |
| G949426 | NA | other | upstream | 395287 | 16293514 ~ 16294051 (-) |
| LOC118937322 | LOC106579448 | coding | downstream | 150 | 15889428 ~ 15896674 (-) |
