LOC110535396 (nceh1)


Basic Information

Item Value
gene id LOC110535396
gene name nceh1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 16849751 ~ 16855529 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935058.1
GTTATGAGGCTCCGCTGGTCCGGGGGCGTGCTGCTGTCGGTGGCGGCTGCCTACTACGTCTATACTCCGTTACCGAGTGCGGTGAGCGAGCCCTGGAAGCTCATTCTGCTGGACGCGCTGTTCCGGAGCTTCATACATGCGGTAGGACTGACTGggtgATGCGGCGCAAGCTCTAGGGGTGTGTCACAGTGTTCATATGTTGAATTCTGTGGTGTCTCGGTTGGAGGTGATTGAGCCATGGTCTAGTCCTACTGTACGTGTCACTGACTCCGCCTTGGGGGGCGTGCCCGCACGAGTGTTCCAGCCAGTTGGAGGAGGAGCCAAGCTCAGGAGAGGAGTGCTTTACTTCCATGGTGGGGGATGGGCCCTTGGCAGCGgacgaATGAGATCTTATGACCTGCTGTGTAGGAGGATGGCTGAAGAGCTGGATACAGTCGTTGTGTCAGTTGATTACCGCTTGGCCCCTGATTCAGTGTTTCCAGACCAGTACCATGATGCTCTAGCAGCGTCCAGGGCCTTCCTGTCCCCAGAGGTCTTGCAGCGCTTTGGGGTCAACCCAGCCAGGGTGGGGGTGTCTGGAGACAGCTCTGGGGGGAACCTCGCTGCAGCCGTGGCCCAGCGGATTTCTGCAGATGACAGTATGAGTGTGAAGTTCAGTATCCAGGCGTTGATCTACCCAGTCCTCCAGGCTCTAGACCTGAACACCCCGTCCTACCAACAGAACCACAACGTACCCATCCTGCACCGACACCTCATGGccagGTTCTGGCTGATTTACCTGGGGGctgatccctctctcctccctcatctcctctcctcaccctcctccctccttcatccctccatctctccttccatccGTTCTCATCTCAACTGGACCTCCCTGCTCGCGGCCAAACACCAAAAGCATTACCGTCCCGTTGGCATGGAGACTGGGTCGCGGGAGGTCACGGGGATAGTGCCGGGGTTGGTGGATGTGCGAGCGGCGCCGTTGCTTGCAGAACAGGGGATTCTGGGTAGAACGCCGCGAGCGTACGTGATGACGTGTGAGTTTGATGTTCTGAGGGACGATGGGTTGATGTACGCCAGGAGACTACAGGACGCGGGCGTCACGGTTACCAGTGTTCACTATGACGACGGTTTCCACGGCTGCATGGTCTTCTCCTTTTGGCCGTTTTTGTCCTCCGTTGGCCAGAGGAGTCTGGACAACTACATCCAGTGGCTAGACGACAACCTCTAGAACAGCCATACTCAACAGGCGGACCGCGGTCTGGAACCGGACCCAGAAGAGGGTCAATACGGACAGTGtgtttaaaatctattttttaaGAAATCAATCAGGCTTTAAACTTACTGCTGTTGAGTAGTTATCATGGGCAGGGGACTCGACCCCAAGGGGGCCCCCATGGATTTTGTTGAATCACTCAGGTATCATATGAACACACATAAgaagacatggcaaaatgtgtagaattgcaagaaatttgctttaaaactgctacGTTTGTTCTCCGCCAGCAGAAGGGGTGTGAATTGTTTGAACAGTTTAGAGTTACATGCGTTGCGAAGGGCGGGTTTGTTACTACGCCGACAGATGACAATACCCATCCGGACCGACCTTTGCCACTTAGGAAATTTGTGTGACCAGACCATCTAAAATAGTAGTCTAGACCACGACAGAACCCTATGGAACCCAAGTTATGTTGAGAATCAAAACTATAGGATTACAACCTAGAACCCAATAGGAGCACCACTAGGACTAAAATGTCCAGGCAACCAGACAACCACACCTCCCATGCCTCTTTCCTTTTGACTACCTAGCTGATCCTGTGGTTGTTCAATGTAAAGACCGTGAACTGTCAGCTGTCTATGGAAACTGATTTAAAGCTTTGAATGCTAACAGTCTGATACACTGAAAGACTGACCAACATACACATCTGTGTGGAATCTCTGGGTTGTGCAATaatatgttgtatttatttatttgaccattCCAAGCATAGAGAAGCAGGCAGAAGAGGGCCAAAAACAGACCTCACCACATGTTTTAACTACAGCCCCCGAGGAACAGTGTTTTACCAGGGTATAGGACCACTAAGAGAGAATCTGACACGGCATGAGACCAGACAGGCTGAAAAGTATTTTTATAGATATTATTTTAGAAATGAAGTAACTCACTGGGCAAAAATGGTTGAATCAGCATTTTTTCCACTTAAAAAACATCTGTGATGGAAAATTGATTGGATTCGCAAAAAGTCATTAACCTAAGGGAATTTTGtcatttttttcacccaacttttgacctaaatccaatgacatggtgaaattgtttgttgatttcacgttgaatttaCGTtattgacaactcaaccaaatgtaaatcaaaactacacGTTGaaatgatgtctgtgcccagtgtgaaAATATGTTATGTGCAGAGAGAACATTGACCATAGAACGTGTGTGTTTTTTTAGTATAAGGAATGTTGTCTGTTCTAAATCCGTCAAAGGATCAGGTGTTTGTGTTATGTGAAGATATAAAGCCACGTGAACCAGGAATTCCAGGTATTCCAAATGGGCTGTCCTCCTTTCTCACACAATGTACGTAGCTGTTGGTTTGgcgtattatgttgtgttttccTTTTGCCTGCTATTTGTTGACCACTCGGACATTTCAATGTACTTTAGGCCTGGCCAAAGTCATACATTTAGACATATGTCTCTGGGCCTGGCTATTGACCCTGGGTGTAATACCACTACTAGACAGATGGTGACACTGTTGTGCCCTACAGATTAGAAAACCCCTTCCAAGAATCACCTGACTGTAAACTGGTAGGGAACAAAGGCCTCCGTTTGAGCTTAAACTGTGAAGTTTTATATTATCACTGGAGAGAATTTAAACTAATGAATATATgtacataaaatatatattttatctgATGTTGAGTCTAAATGGATCTGAAGTTTCAGTGGCTTGGTTCAGCTAACTTCCTGTTCTGAGCACAGTAttgtaatatacactgctcaaaaaaataaagggaacactaaaataa
>XM_021620375.2
AAGATAGGTAGAAACTGCTTCTGCAATAGAAATCCCCGAGAACACTTGTAGGCGATGTGATGGCTACGTTGGCTAGTTAAACTCATGCGTAGAAACACGTCGACGGGTGTAATGGTCGTGTCATGCAGAAATGCGAACGTCAAATCAGGCATTCcttaaagttgtttttgacgaaCATGAAAACGTGACAGTTTGCGATGTTGCGTCTCTGGGTTtactgggtttagaaactctgtgccTTCATGCTACGGTTATGAGGCTCCGCTGGTCCGGGGGCGTGCTGCTGTCGGTGGCGGCTGCCTACTACGTCTATACTCCGTTACCGAGTGCGGTGAGCGAGCCCTGGAAGCTCATTCTGCTGGACGCGCTGTTCCGGAGCTTCATACATGCGggtgATGCGGCGCAAGCTCTAGGGGTGTGTCACAGTGTTCATATGTTGAATTCTGTGGTGTCTCGGTTGGAGGTGATTGAGCCATGGTCTAGTCCTACTGTACGTGTCACTGACTCCGCCTTGGGGGGCGTGCCCGCACGAGTGTTCCAGCCAGTTGGAGGAGGAGCCAAGCTCAGGAGAGGAGTGCTTTACTTCCATGGTGGGGGATGGGCCCTTGGCAGCGgacgaATGAGATCTTATGACCTGCTGTGTAGGAGGATGGCTGAAGAGCTGGATACAGTCGTTGTGTCAGTTGATTACCGCTTGGCCCCTGATTCAGTGTTTCCAGACCAGTACCATGATGCTCTAGCAGCGTCCAGGGCCTTCCTGTCCCCAGAGGTCTTGCAGCGCTTTGGGGTCAACCCAGCCAGGGTGGGGGTGTCTGGAGACAGCTCTGGGGGGAACCTCGCTGCAGCCGTGGCCCAGCGGATTTCTGCAGATGACAGTATGAGTGTGAAGTTCAGTATCCAGGCGTTGATCTACCCAGTCCTCCAGGCTCTAGACCTGAACACCCCGTCCTACCAACAGAACCACAACGTACCCATCCTGCACCGACACCTCATGGccagGTTCTGGCTGATTTACCTGGGGGctgatccctctctcctccctcatctcctctcctcaccctcctccctccttcatccctccatctctccttccatccGTTCTCATCTCAACTGGACCTCCCTGCTCGCGGCCAAACACCAAAAGCATTACCGTCCCGTTGGCATGGAGACTGGGTCGCGGGAGGTCACGGGGATAGTGCCGGGGTTGGTGGATGTGCGAGCGGCGCCGTTGCTTGCAGAACAGGGGATTCTGGGTAGAACGCCGCGAGCGTACGTGATGACGTGTGAGTTTGATGTTCTGAGGGACGATGGGTTGATGTACGCCAGGAGACTACAGGACGCGGGCGTCACGGTTACCAGTGTTCACTATGACGACGGTTTCCACGGCTGCATGGTCTTCTCCTTTTGGCCGTTTTTGTCCTCCGTTGGCCAGAGGAGTCTGGACAACTACATCCAGTGGCTAGACGACAACCTCTAGAACAGCCATACTCAACAGGCGGACCGCGGTCTGGAACCGGACCCAGAAGAGGGTCAATACGGACAGTGtgtttaaaatctattttttaaGAAATCAATCAGGCTTTAAACTTACTGCTGTTGAGTAGTTATCATGGGCAGGGGACTCGACCCCAAGGGGGCCCCCATGGATTTTGTTGAATCACTCAGGTATCATATGAACACACATAAgaagacatggcaaaatgtgtagaattgcaagaaatttgctttaaaactgctacGTTTGTTCTCCGCCAGCAGAAGGGGTGTGAATTGTTTGAACAGTTTAGAGTTACATGCGTTGCGAAGGGCGGGTTTGTTACTACGCCGACAGATGACAATACCCATCCGGACCGACCTTTGCCACTTAGGAAATTTGTGTGACCAGACCATCTAAAATAGTAGTCTAGACCACGACAGAACCCTATGGAACCCAAGTTATGTTGAGAATCAAAACTATAGGATTACAACCTAGAACCCAATAGGAGCACCACTAGGACTAAAATGTCCAGGCAACCAGACAACCACACCTCCCATGCCTCTTTCCTTTTGACTACCTAGCTGATCCTGTGGTTGTTCAATGTAAAGACCGTGAACTGTCAGCTGTCTATGGAAACTGATTTAAAGCTTTGAATGCTAACAGTCTGATACACTGAAAGACTGACCAACATACACATCTGTGTGGAATCTCTGGGTTGTGCAATaatatgttgtatttatttatttgaccattCCAAGCATAGAGAAGCAGGCAGAAGAGGGCCAAAAACAGACCTCACCACATGTTTTAACTACAGCCCCCGAGGAACAGTGTTTTACCAGGGTATAGGACCACTAAGAGAGAATCTGACACGGCATGAGACCAGACAGGCTGAAAAGTATTTTTATAGATATTATTTTAGAAATGAAGTAACTCACTGGGCAAAAATGGTTGAATCAGCATTTTTTCCACTTAAAAAACATCTGTGATGGAAAATTGATTGGATTCGCAAAAAGTCATTAACCTAAGGGAATTTTGtcatttttttcacccaacttttgacctaaatccaatgacatggtgaaattgtttgttgatttcacgttgaatttaCGTtattgacaactcaaccaaatgtaaatcaaaactacacGTTGaaatgatgtctgtgcccagtgtgaaAATATGTTATGTGCAGAGAGAACATTGACCATAGAACGTGTGTGTTTTTTTAGTATAAGGAATGTTGTCTGTTCTAAATCCGTCAAAGGATCAGGTGTTTGTGTTATGTGAAGATATAAAGCCACGTGAACCAGGAATTCCAGGTATTCCAAATGGGCTGTCCTCCTTTCTCACACAATGTACGTAGCTGTTGGTTTGgcgtattatgttgtgttttccTTTTGCCTGCTATTTGTTGACCACTCGGACATTTCAATGTACTTTAGGCCTGGCCAAAGTCATACATTTAGACATATGTCTCTGGGCCTGGCTATTGACCCTGGGTGTAATACCACTACTAGACAGATGGTGACACTGTTGTGCCCTACAGATTAGAAAACCCCTTCCAAGAATCACCTGACTGTAAACTGGTAGGGAACAAAGGCCTCCGTTTGAGCTTAAACTGTGAAGTTTTATATTATCACTGGAGAGAATTTAAACTAATGAATATATgtacataaaatatatattttatctgATGTTGAGTCTAAATGGATCTGAAGTTTCAGTGGCTTGGTTCAGCTAACTTCCTGTTCTGAGCACAGTAttgtaatatacactgctcaaaaaaataaagggaacactaaaataa

Function

symbol description
nceh1 Predicted to enable hydrolase activity. Predicted to be involved in ether lipid metabolic process. Predicted to act upstream of or within SMAD protein signal transduction; protein dephosphorylation; and xenobiotic metabolic process. Located in membrane.

NR:

description
neutral cholesterol ester hydrolase 1 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0052689 carboxylic ester hydrolase activity molecular_function

KEGG:

id description
K14349 NCEH1, AADACL1; neutral cholesterol ester hydrolase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935058.1 False 3053 mRNA 0.47 6 16849751 16854673
XM_021620375.2 True 3290 mRNA 0.47 7 16849751 16855529
Loading

Neighbor

gene id symbol gene type direction distance location
LOC100136317 LOC100136317 coding downstream 6933 16834398 ~ 16842818 (-)
LOC110536607 NA coding downstream 45886 16801581 ~ 16803865 (-)
LOC110535393 LOC106579498 coding downstream 59548 16787452 ~ 16790203 (-)
LOC118937469 NA coding downstream 278192 16567348 ~ 16571559 (-)
LOC110536562 LOC106579476 coding downstream 283583 16559194 ~ 16566168 (-)
LOC110535400 LOC106578397 coding upstream 159763 17015292 ~ 17017135 (-)
LOC110535401 LOC106578376 coding upstream 162127 17017656 ~ 17021148 (-)
LOC110535402 LOC106578378 coding upstream 178632 17034161 ~ 17035895 (-)
c8g LOC100136109 coding upstream 181122 17036651 ~ 17042895 (-)
msrb2 LOC106578379 coding upstream 189208 17044737 ~ 17047374 (-)
G949693 NA non-coding downstream 50418 16799133 ~ 16799333 (-)
G949690 NA non-coding downstream 55631 16793836 ~ 16794120 (-)
G949671 LOC106579490 non-coding downstream 88902 16757817 ~ 16760849 (-)
G949635 NA non-coding downstream 130675 16717822 ~ 16719076 (-)
G949560 NA non-coding downstream 212762 16563634 ~ 16636989 (-)
G949694 NA non-coding upstream 40007 16895536 ~ 16896534 (-)
G949770 LOC106578374 non-coding upstream 73781 16929310 ~ 16929846 (-)
G949736 NA non-coding upstream 111628 16967157 ~ 16976538 (-)
G949803 NA non-coding upstream 168207 17023736 ~ 17025028 (-)
G949820 NA non-coding upstream 194695 17050224 ~ 17093027 (-)
otos LOC106579496 other downstream 534904 16312928 ~ 16314905 (-)
cops9 NA other downstream 541151 16302932 ~ 16308724 (-)
G949426 NA other downstream 555700 16293514 ~ 16294051 (-)
tnfrsf11a tnfrsf11a other upstream 1011320 17858123 ~ 17879460 (-)
LOC110535423 LOC106578417 other upstream 1195141 18050118 ~ 18138989 (-)
G950851 NA other upstream 1300155 18155684 ~ 18157247 (-)
zfhx4 LOC106578414 other upstream 1387681 18234892 ~ 18365014 (-)
G951231 NA other upstream 1721786 18577315 ~ 18583155 (-)

Expression

LOC110535396(nceh1) Expression in all Baseline Samples

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LOC110535396(nceh1) Expression in each Bioproject

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LOC110535396(nceh1) Expression in each Sample
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Co-expression Network