Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118937326 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 17386005 ~ 17391059 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC111570753 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034593.1 | True | 543 | mRNA | 0.42 | 3 | 17386005 | 17391059 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ezh2 | ezh2 | coding | upstream | 16796 | 17356706 ~ 17369209 (+) |
| LOC110535409 | LOC106578385 | coding | upstream | 33564 | 17342791 ~ 17352441 (+) |
| LOC110536567 | pkd1l1 | coding | upstream | 43374 | 17289622 ~ 17342631 (+) |
| spag6 | spag6 | coding | upstream | 100436 | 17281407 ~ 17285569 (+) |
| bmi1a | LOC106578384 | coding | upstream | 114836 | 17254655 ~ 17271169 (+) |
| LOC110535414 | NA | coding | downstream | 53209 | 17444268 ~ 17537220 (+) |
| tpk1 | NA | coding | downstream | 318628 | 17709687 ~ 17789321 (+) |
| pign | pign | coding | downstream | 535575 | 17926634 ~ 17945204 (+) |
| LOC110535422 | LOC106578412 | coding | downstream | 558370 | 17949429 ~ 17960000 (+) |
| hnf4g | hnf4g | coding | downstream | 569127 | 17960186 ~ 17981897 (+) |
| G949105 | NA | non-coding | upstream | 26627 | 17359137 ~ 17359378 (+) |
| G949103 | NA | non-coding | upstream | 29601 | 17356018 ~ 17356404 (+) |
| G949087 | NA | non-coding | upstream | 72732 | 17313051 ~ 17313273 (+) |
| G949120 | NA | non-coding | downstream | 12293 | 17403352 ~ 17403588 (+) |
| G949136 | LOC106578389 | non-coding | downstream | 37431 | 17428490 ~ 17459732 (+) |
| G949183 | NA | non-coding | downstream | 122762 | 17513821 ~ 17520003 (+) |
| G949186 | NA | non-coding | downstream | 125856 | 17516915 ~ 17518259 (+) |
| G949255 | NA | non-coding | downstream | 243919 | 17634978 ~ 17636793 (+) |
| G948710 | NA | other | upstream | 784113 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 840716 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 1050713 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 1059598 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 1175165 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 1735606 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 2370206 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 5335494 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 6274229 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 6384713 | 23775772 ~ 23776845 (+) |
