XLOC_028356 (CU856344.1)


Basic Information

Item Value
gene id XLOC_028356
gene name CU856344.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 48519 ~ 53370 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055090
atgaggaCGCTCCACAGACTGTCGTTGATGAGTTCTCCCAGTCTGAATGATTCGGGTCGGTCCGAGAGATCAGCGCTGGACGACAGGAACAACCAGCAGCAGCAGAGAGCGGGAACCAACGCCACCTggaacagcatccACAATGCGGTGATCTCGGTGTTCCAGCGCAGGGATCTGGCACAGAATGAGCTGTATGTGCTGAATGAAGGCgggcgagtgtgtgtgtgcgacgTCACTCCGTCTGCCAGATGA
>TCONS_00055091
atgaggaCGCTCCACAGACTGTCGTTGATGAGTTCTCCCAGTCTGAATGATTCGGGTCGGTCCGAGAGATCAGCGCTGGACGACAGGAACAACCAGCAGCAGCAGAGAGCGGGAACCAACGCCACCTggaacagcatccACAATGCGGTGATCTCGGTGTTCCAGCGCAGGGATCTGGCACAGAATGAGCTGTATGTGCTGAATGAAGGCGTCAGGCAGCTCCTGAAGACAGAGTTGGGCTCATTCTTCACAGAGTATCTGCAGAATCAGCTGCTGACCAAGGGAATGGTGATTCTGAGAGATAAGATCCGCTTTTATGAAGAAGCTGTTGGATTCTCTGGCAGAAACCTGGGATTTCTTCTTCTGTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115971

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055090 False 252 mRNA 0.57 3 48519 53370
TCONS_00055091 True 369 mRNA 0.52 5 49992 53370

Neighbor

gene id symbol gene type direction distance location
XLOC_028355 ptpn12 coding downstream 30308 17308 ~ 18211 (-)
XLOC_028354 NA coding downstream 36179 6163 ~ 12340 (-)
XLOC_028357 NA coding upstream 2655 56025 ~ 64703 (-)
XLOC_028358 NA coding upstream 18093 71463 ~ 72658 (-)
XLOC_028359 NA coding upstream 20060 73430 ~ 74608 (-)
XLOC_028360 NA coding upstream 46621 99991 ~ 101377 (-)
XLOC_028361 dusp16 coding upstream 53917 107287 ~ 119689 (-)
XLOC_028362 NA non-coding upstream 62952 116322 ~ 119194 (-)

Expression


Co-expression Network