ankrd33ba (LOC106578420)


Basic Information

Item Value
gene id ankrd33ba
gene name LOC106578420
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 18822334 ~ 18844891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935118.1
CAGAAAATGTACATTTGAAACCGCAGAATGATTGCACAGACGTTTTACTTTGCTTTTGCAGTATGAATCATTCTAACGATGACCAATGTCTCATAAAACGGTTGCAATGGGGTTGCCCCCATTTAGCTAAAATTATAATCTCAAAGTATTTCTGATGTCAACATTTCAGACAGAGCGGAATTAATCTGCTCAAACGAAAACGAAATGAGGGAGGGCATGAGGGGAGAGCCATGGAGAGGAGGGGGCAGTTGGCTACGAAACTAATCGGATTATGGGACTACAGTTTATCGAGTGCCTGTTTTTCTACTCTGCGCGTTAGCTGGGTGAGTGTGGCTCTTTTACTTTGGGTACTGCGTGTCTATTGTTTTCTGTCCTAATGAGGAACACATTTTTTTTCGTACTGATGATGACACAACAAGAGTTGGCGTAACTCTCGGGTTTACTTCGTGTCGGCAAAGGGGGATTGTTGACTGTTGAATTGCACTTTAAATCACGGGCATTTCATTTTCTCACTGCTCCAGACGTGATGGAAAAACTTTCTGTGTTTTATAAAATGAACAAAAACAATCATCTTTTGACTCCGGTGAAGGCTACAACCCGGTGTAGTTTACGTTGGTATTCCAGGGACAGCGCAGCGATATGATTTCATGTTAATTTATCTCTGGGATGCTGGAGTTGGACTATTATCAGGGGAATATTCCTCAACGGAGTAGGATCAGCAGTTTGCCTGTAAATTCACATCACAACGAGTTGCCAAACCTTCACTGTCATTCCATTTCCAGGCTCTTTGCAAAGTTCAACTCATACTCCGCGTTGATGTTGGAAAAAACGTCCACGTGCTCTTCGCCCGAGATCCACCCGTTCTTCCCCCCTGAGGAGGACAGCCACCTAGGGGGTTAGATGGTGCTGATCACGGATGAGAGAGACGGAGGTGGCTCCTCTACTACGGTTCGAGTcaaacagcagcagcagaaccCCAAAGGCGCCAGCGGCATCGCCCAGGTCCATCCGACCATTACCGAGGAATCACCGTCCTTATCAGACGATGACTCATACCTCGGGTCCTGCGAGTCAGAGGGGGATGAGTACGAGGAATACGACGATTTCTCGTTATTACCGGACAGTAAAAGTATCGCTTCGGACGACTCCTTTTACCCACCGGACGATGTGTTCGCGGACAACGAGCGGACCCCCTCTCCACCGAGTCCCGAGCCGCTGACGTTCTTCCAGGCGTGCTGCACCAACAACGCCACGATAGTCCGGATCATGATCCGACAAGGTGTGGGGgtagaggaggtgagggagacgGATAAAAACAACAGGaCGGGGCTGATGGTGGCGTGTTACCAGGGTTACGTTGATGTTGTCATAGCGCTGGCCCAGTGTTCTCACCTGGATGTCAACTGGCAGGACAAGGAGGGGAACACTGCCCTCATCACCGCTGCCCAGgcaggtCACATAATGATCAGTAACTACCTGTTGAACTACTTCCCTGGTCTGGACATAGAGAGGAGGAACTGTCATGGCTTCACTGCTCTGATGAAGGCTGCTATGCAGGGCAAGGTGGAGTGTGTACGAGCCCTGATGCTAGCAGgAGCTGACATGGAGACGAGAGACTTTGGTCGTAAGCTGACCTCCAGAGAGTGGGCGCTCTTCACGGGACGCTACGAAACCGCCTGGGCCATGACACGCCTCGTCTCCCGACCCTGTCCTTATCAACTGTGTGACGCTTACAGTCCAGAGTGGCCTCAGCTGGCGTCTCTAGTATCTAAGGCCCGGGAGCCTCGAGGCTGTATGCAGCGTATATCAGACACCATACGGAATGCTCTGACATTCGCTAACATCACAGAGCCTGACGACGGAGGAGTCTTAGATCACCTAGTCACCGTGACAACAGCCCTAGGGAGCCCCTTTGTGGCAGTGGCGTGTACCACCGTGTGTCCGTCAAGCCCGCCCTGCGTGGGTAAACGTCGTTACTCCGTCCCAGAGATCCTCCGACGCCAACGGGCCAAAGAACTGAAAACCCAGAACCCTGAGAGGCTCGACGACCACCGCAAACTCTTCCAGAATTCACGGGTCACTCTGGTGCCTAAACCCCCAAAGGATCGGCGGTCCAGCCTCCCGCCGCAGAACAAAAGCCCCACCACGACTAACCCTAACCTGGGTACAGTGTCTGGGTCCGTTTCCTCGGTGGCCCTGCGTAGAGCTAGCCTGCTGCCCCTGGGTATGGTGAGACGTAGTAGTGTACGACCAGGGCTGTCCATTCCCAAGGTGAGAATCACTAAGGCCCCAACGCCCACCTATGAACCTGAGAGAGTCCGCAGGAAGAGCAGCTTTAAAGACGGCGGGGGCAACTTCCTGCAGCTCCCAAAGTGGAGGTATAAAgaactgaaggaggagaggaagagagcggaggaggcagagaggaggagggtagaggtggCCACGAGACGGCACCTGGCTGTCGGGAAGAGGAAATGACACCACaagaggaagtgatgtcactCCACCCTTTCCTCCACTGTTGCCAGGCCAGTAGATAGTGTTCAGAGGGGGTTGGATACTTGAAATGATTGATGTTAACTTATTTTCGTATTTATTTCGCTTTCTTTGGAGTAAAAGTGACAGCGCTTTATTTTGTCATGCATTTCCTTCACAAAATCATCAGTATTTTAATAGGGTGATTTCTGTATTACCTGGCACTTACCCAGGTTACAAACCCATATGACTGACTACAGATAACGTTTCACTGATATCTGACGCATCACAAATGGAAACTTTCTTGCCTAAAATGATGACACAATAAGCGTCGGGGAAGGGTTTGAATGGGACAAATAAGAAGGGTTACAATATTGCGTAGCCTATAAAACCATTGAGTAAGCCTACCAGCATGTCAAACTGATTTACCGCCAAAGCTAAACATAAGCTTTATTTTATAAGCAATGGCATTTGTCTGAGCAATAGTAGTTTCTTTTTAGATAGGCACCATGGTATGTTTATATTGGCTTTTTGAAAGCTTTTTTAATTCTGTGAATGTATTTTGCATATagattgggccagtaaccgaaaggttgctggatcgaatccccaagctgacaaggtaaaaatctgtcattctgcccctgagcaaggcagttaacccactgttcccgggcgccgaagacgtggatgtggaTTATGGCAGCAgctccacacctctctgattcagaggggttgggttaaatgtggaagacatttcagttgaatgcattctgctgtacacctgactaggtatccccctttccctttcatcAGGTATTTTCAATAAGAGATATAAAGGTGGCTTTTTTGAATCACTTTTTATTTTCTACTAAAGTAGACATATTAAGAGAATGTGAATGAAATGGTTTTCAATGTCTGAAAGAAATATCCCAACGCTACACTATTGTGATGTGACACTTAAGGGCTTAAGCGATATACATTTtaaggtcatttccgattgagccgacatatgcagtgtttaccgtgaatgcagccTCTGCTAATACGAGAACATTGCTTTTGCATCACTTCCatgatacggattgaatagagctcaTTATCTGGAAGTGGGGGGGGAAACTGGAACAATATCCTGAAATGTTTGCATGTTATGAATGAGATCTACATATTGCTACACTGACCTCAGATCAGAGTGCTTAATACAATACAAACGTGTACTTCGATGACAGAACAGAGGTCAGAAGAGTAAGGAACTATTCCATGTAACTTGGTTCAGACATTTAATAGAAAATAATTGGATGAAAATAGCTGGAGGTATGAACATAAACAGCAACTGGAAAGCACTGATATTATATTATTATGGTAGGGATTGAAGAGAAGATCATTTCACGGTAACAACCCCAAGGACAGGACAGGAAGCTTTAAGTGCAATCTTCAAGTGTGTCTAATAGCCATGGTGATCAGTTGCTGTGGCGTTACCAGGGGGCAGTGATTGGCCAAATAATAATTTCTGTAAATAAATGGAGCGGGCTATGCAGGAGTGTAACACTGAAATGCTTCCCAGTGGAAGGTAATCTTAACTTGGAAATGACAAAGTGCATTTTTGGACTCGCCCCCAGACATATCGCTAACACTAACACTTTGCCCCATCTCCTCAAAGTGTTCACTGGTGGAAACTCTCTAAACACTCtgcttatacagttgaagtcagaagtttacatacacttaggttggagtcattaaaactcatttttcaaccactccacaaatgtcttgttaacaaa

Function

NR:

description
PREDICTED: ankyrin repeat domain-containing protein 33B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935118.1 True 4265 mRNA 0.47 6 18822334 18844891

Neighbor

gene id symbol gene type direction distance location
LOC110535429 nup58 coding upstream 19463 18790170 ~ 18802871 (+)
pex2 pex2 coding upstream 618181 18192624 ~ 18204153 (+)
hnf4g hnf4g coding upstream 840437 17960186 ~ 17981897 (+)
LOC110535422 LOC106578412 coding upstream 862334 17949429 ~ 17960000 (+)
pign pign coding upstream 877130 17926634 ~ 17945204 (+)
LOC110535436 LOC106578460 coding downstream 453688 19298579 ~ 19310732 (+)
LOC110535438 NA coding downstream 485090 19329981 ~ 19335648 (+)
ssm4 ssm4 coding downstream 497090 19341981 ~ 19345685 (+)
LOC110535439 LOC106578454 coding downstream 532244 19377135 ~ 19385929 (+)
LOC110535440 LOC106590594 coding downstream 556631 19401522 ~ 19414736 (+)
G951340 NA non-coding upstream 9568 18812408 ~ 18812766 (+)
G951277 tlr13 non-coding upstream 95241 18717429 ~ 18727093 (+)
G951270 NA non-coding upstream 145306 18649576 ~ 18677028 (+)
G951225 NA non-coding upstream 226842 18562338 ~ 18595492 (+)
G951335 NA non-coding downstream 465 18845356 ~ 18845789 (+)
G951352 NA non-coding downstream 1281 18846172 ~ 18846434 (+)
G951353 NA non-coding downstream 2080 18846971 ~ 18847197 (+)
G951362 NA non-coding downstream 27960 18872851 ~ 18873196 (+)
G951367 NA non-coding downstream 35841 18880732 ~ 18880991 (+)
G948710 NA other upstream 2220442 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 2277045 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 2487042 16327393 ~ 16338373 (+)
G948587 NA other upstream 2495927 16323350 ~ 16326407 (+)
ccl20b LOC100135878 other upstream 2611494 16209929 ~ 16211192 (+)
G951511 NA other downstream 281774 19126665 ~ 19127085 (+)
phldb2b tcpe other downstream 916374 19740565 ~ 19799150 (+)
tlcd4a LOC106570700 other downstream 3881662 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 4820397 23665288 ~ 23665930 (+)
G956797 NA other downstream 4930881 23775772 ~ 23776845 (+)

Expression


Co-expression Network