abcc13 (LOC106578442)


Basic Information

Item Value
gene id abcc13
gene name LOC106578442
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 19684636 ~ 19701763 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935131.1
CAGGCGGTCAGCGGGATTCTACAACACGCTTTACGCTCCTTCAACATCCATCAATTCATTCACTCAGTCATAGCCATGCAACGACAATGGGAACGGATATTTAAAAACTGCAAAGGCAAACAACAAAGAAAAGAGGTCACCAGGCGTAAATTGACAAATTGGGGCTTATATCGTGCTTTCAGGTTGTTTTCTGTTATGAAATGGACCAGATCTTAGCCTAATGTCGCGTGCTGCTGTCAGTCTGCTGCTGCTGTGGCCGCGTGCAGATGTGGACATACTAGTACATTAGGCCATTCACCCCGCGAGCTATTGTCCCCTCCATCCTCTTCCACTCCATCCCCTCACTCGGGGCCAAACTGGCGTGTGCGTCCCTCCCCGGGtatgtctctccgtctctccgccAGATGGGGCGGAAAACAGAAGCCAACTCTGGAGAGGGATGTTTCCTTCCTCAGCCGTTTGTCCTACTGGTGGATTTACAGAGTCGTTTCAGCGGGCCATAGGAGGGGGCTACAGCTGTCGGACCTGTGTTGCCTTGGCGATGAGGACTCAGCCCAGAGTTTATGCTCAGCcctccagcagcagcagcagcaccggACGACAGAGGGACGGAGTCATAGCCAagagtcaggagaggaggagtCACTGGGTGGAAACACCTCCCACCCAGGTGTTCACCTGTCTGGCCCCGCCCTGCTGTGTCATCTGTATGGGTGGCTCCGCCCCTCACTGCTCCAGGTGACCCTGCTGAGGATGACCTCTGACCTACTGGCCCTCCTGCCCCCTCAGGccctcagGTGTGGTATTCTCTACTGTGAGAACCAGCCTGTCTTTGATTGGTCTGGACTTACCCATGCCCTGGCACTGTTGGCTGCTGTAGTGTGCCATGCCCTGGTCCAGCAGGTGTGTGAGCGTCACAGCAGGATGACTGAGGTCAGAGTTCAGACAGCGCTGACTGGAGCCTTgtataaacagGCCCTGTCCCGGTGCAGTATTCCTGGGTGTCTACCCTCCCCTGCTCCATCGTTAACCCCACTCCGGGCTGACGTTGGACGGTTAGCAGAGCTCCCAGTCTCCCTGTCTGCCCTGTGGTCTTCCTCTGTgcaggggacagtgtgtgtgtgtctgctgtggaGAGAGCTGGGTCCCTCTTCTCTGGCGGGACTAGCTGTATTGTTACTGCTGGTACCGCTCACCTCTGCTGTACAACGCAGGGCAAGGCTATTACAGAGAAgccaggagagagtgaggggagaaagACAGCAGCTCGTGCAGGAGATGCTGAACGGAATCAAAaCGGTGAAGTTGTTGGTCTTGGAGGCGTGGTTCCAGTGCAGAGTGGGCATTGCCAGAGAGAAGGAGCTGGAGACGCTGAGGATTCTGGGATTCCTGACGGCCTTCTCCCTATTGGACCGCGTCTGTGTGCCTTTCCTGgtgtgtgtgtccagtttgGGTGTGTATGTGCTGGTGGATGATGGTAACGTTCTGACAGCGTCTCAGGTGttcacctgtgtgtgtctgttcacactgctacgcTCACCTTTTAACCTACTGCCCTCCCTGGCACTGCAcctcacacagACCTGGCACTCCCTCTGTCATCTGGACCACTTCCTCTTCTCACAGGAAGTCTCTCACACAGAGAATGGCACTCTTTCAGAAAATGGGGTCAAGAAAAGCTGTCTCGAGGAGCACTcagatcgGTGCAGTAATGAGACCTTGAGAGAGACAGAAGCAAACACTGTACCTCTGCCCAAACATGGTGTGAGCAGTGTGTGTATTCGGCTGTATCTGCATGTGTGTGGCTTGGGCTGGGTGTTGTTGACTGTATTAtcccaggtgtgtgtttgtgtggtgggtgtgtgtcAGACCGGTCTGTTAGCCGTGTGGACCAGACAGGCTAAAGAACTACAGGggctggaggagtggagagaactACGAGACTCACGACTATCTGTCTACGCTGTACTGGGGCTgctgcaagCTCTGTCCGTGTGCTGTGTAGCATTAGCAGTAACTGGTGGTTCTCTGAAGGCGTCTGCCAGTCTCCACTCTGAGCTGCTCTTTGCTCGGCTCCGCCTTCCTCTCAGATTCTACCAGATCACGCCCTCTTCTCTGGTCCTGCGCAGCCTATCACAGgagatGTACGTGATTGACGAGCTAGTCCCCGCCAACCTCCTCTCCTGGCTCTCCTGTTGGCTGCAGGTGTTTGTGACAGTGCTGCTGATTggctacatctcccctctcttcaTCCTGATAGTTCCGGTGCTGACTTACCTCTTCCTCACAATACAGtcataCTACAGGTCAGTCTCGGGTCAGGTGAGGAGGATGGTTTCagactctgcctcctctctctcatccctcctttctGAGTCACACAGGGATGAGGTCACCAGTGGTAGTCATGACGACCCCTTGACCCGTTGCTATGGTGCCCTCAACGAGCACCTGGTGTGTCGCTACAACTGCATTTTGTTGAACAGgtgGGTATCAGTGTGGTTGGATGCCTTTGCAGGACTGGTTCTGTTCCTGGTCTCTGTGACTCTACTGGACTCTGAGGTAGACCCCAGTACTGTAGGACTGGTCCTGACTTACACCCTCAGCCTGAGAGAGGTTCTTCATCTCCTGGTCCAAGCAAGCTGTGGCGTAGAGAGCAGTGCTGGTGCCATCCAGAAGATGGACCAACATgcacacatggagagagagccCCCCTGGTCTGTGCCCTTTAGAGCACCCCCTAGCTGGCCAAAGGAGGGAGTGGTGGAGTTCAGAAGCTATGAGACGGAGCTTAACCCATCACCCGCTGAACTGTCTTTTTGCACCCGGACCAGAGAGAAGgttggtgtggtgagCAGATCAGGAGCAGAGCTGGATGCCATAACCAGTTCTCTCTTCCGATTGGTGGAGGGCCGAAGGGGCGTGTTGATGATTGACGGGGTGGACATCTCTAGTGTGGGACTCCATGACCTTCGCAGCCGGTTGGCGGTCATAGCTAGGGTTCCAACTCTGTTCTCCTGTTCACTGCGCTCCAACCTGGACCCCTGGGGTTGCCATGGGGATGCCCAGGTGTGGCAGGCACTGGAGAGGTGCCACCTGAAGGAAAGGGTCAGCTTGCTGCCAGGACAGCTCCTCTACCCACTACAACACGGAGGGGCCGGGCTCAGctccAGTGAGAGgaggctgctgtgtgtgtgtcgtgcCCTGTTGAAGGGCTGTGTTGTCCTGGTAGTGGAGGACCCTGTTCCCCCTGTAGACGTCCACACTGAGAGGCTGCTCCAgagcatcatacacacacacttctcccacTGCACCGGGCTGTATCTAACACAGAACCCTGGGAAcgtcacacacactgacaggGTGTTGGTGTTAGATGGGGGACGTGTGGCTGAGTTTGACTgcgcctctgctctcctccagaGGGGGGCACTGTTCTCCCAGCTGCTCTCTGAGACACATAGAAACCAAGACACAGAAGAAGAGTGAAGAACGAGAGTGGAAGTTGGTATTAGGAACAGAACTAGGATCATTTTACCCATGATCATAATGATGCTGGACTAGCTGTTTGAGTTTGCTCAGTTGTTTGAAGCATGGGGTTTCAACACCAGAGTAATAACACCAGAGTTGTGGGTTTCAACACCAGAGTAATAACACCAGAGTAATAACACCAGAGTAATAACACCAGAGTTGTGGGTTTCAACACCAGAGTAATAACACCAGAGTTGTGGGTTTCAACACCAGAGTAATAACACCAGAGTAATAACACCAGAGTTGTGGGTTTCAACACCAGAGTAATAACACCAGAGTAATAACACCAGAGTAATAACACCAGAGTTGTGGGTTTCAACACCAGAGTAATAACACCAGAGTTGTGGGTTTCAACACCAGAGTAATAACACCAGAGTTGTGGGTTTCAACACCAGAGTAATAACACCAGAGTTGTGGGTTTCAACACCAGAGTAATAACACCAGAGTTGTGGgacactttggataaaagcatctgctaaatgaccataTTATTATATTACCATGTGTTAAGTGCCCCTCGTAAGAGTATCCTAAAGGGCTATACATTGTGATGAGGTTACTTACCTCATCCTCTACCAGCAGCGTCCATCTTGGCTCAATGGGGCTATCTGGTTGCCGTGACTGTGATGCTTTTGCAATATGGTCAATGTGAAACTGAGTTATAGAGGAACCGCATGGACTGTGGCCAGGGCTTTAAGTGTACTCAGACTATGTGGTGATACAGGATCAATACTAAAAGTACAACAAATACAGCACAGTAAGCACAGCACTCAATACATACAGCAAGTTTATCTCAATGACTGACACCAGCACAACAAACTACTGCCTGGACtacagactctctctctgtgtctctctcccaacCCCCTTCTCTTAATTTGTTTGATCTCTCGCTCCCGGTTAGGCATAAATCTGTTCTGATTGAAGAGGGCTTTTATTGACCAGGATTATCTGTCCAGCTCTGTATCTACTGTTACGGGTACATTCAGGCTTGGCCAGTACTGTTTATACAAAATCTgtacaatgtatacaaaatgtatTGTGTCCTTTTGAACTCATTCTGACGATGCATGATCAATTGTAACTGATcatcgctgtgtgtgtgtttctaatgAACATCAAATGTTGAAGGTTCTATTTTCTTAATTCTACCCTGAGCTTTAAAATGCAGTGATTACTCATATCTATAATTACCAGaacctccgtgtgtgtgtgctcttgttGAAGCACAGGACTGATAAGTTTAATTGGCAGGCTAATCACTTTAACAAAGTACGACTAATAACTGACTGTGGTAACCCACACACACTCttcagtgtgtgcgtgcgtgtcatgTCTCATCATCGAAAATGCACAATTAAACACCGACGTCAATGAATCACA

Function

NR:

description
canalicular multispecific organic anion transporter 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935131.1 True 4914 mRNA 0.51 20 19684636 19701763

Neighbor

gene id symbol gene type direction distance location
zmp:0000000991 LOC106578445 coding downstream 24127 19643041 ~ 19660509 (-)
LOC110535446 LOC106578446 coding downstream 55409 19627035 ~ 19629227 (-)
LOC110535445 ndub4 coding downstream 70845 19611791 ~ 19613791 (-)
arxa LOC106578448 coding downstream 98297 19565431 ~ 19586339 (-)
LOC110535442 LOC106578451 coding downstream 249910 19426819 ~ 19434726 (-)
LOC110535450 tcpe coding upstream 92363 19794126 ~ 19799188 (-)
sema5a LOC106578437 coding upstream 188814 19890577 ~ 20084385 (-)
si:dkey-118j18.2 LOC106578436 coding upstream 405516 20107279 ~ 20118785 (-)
timm21 timm21 coding upstream 428755 20130518 ~ 20133776 (-)
neto1l neto1 coding upstream 433485 20135248 ~ 20319367 (-)
G953170 NA non-coding downstream 11867 19672535 ~ 19672769 (-)
G952465 NA non-coding downstream 20593 19663775 ~ 19664043 (-)
G952393 NA non-coding downstream 123281 19560175 ~ 19561355 (-)
G952407 NA non-coding downstream 129780 19554352 ~ 19554856 (-)
G952366 NA non-coding downstream 188414 19495370 ~ 19496222 (-)
G953236 LOC106578440 non-coding upstream 66464 19768227 ~ 19769329 (-)
G953243 NA non-coding upstream 83891 19785654 ~ 19787002 (-)
G953255 NA non-coding upstream 115394 19817157 ~ 19818290 (-)
G953254 NA non-coding upstream 118392 19820155 ~ 19849554 (-)
G953283 NA non-coding upstream 157056 19858819 ~ 19859168 (-)
G952255 LOC106578453 other downstream 269900 19401554 ~ 19414736 (-)
dap dap other downstream 820861 18849188 ~ 18863855 (-)
G951713 NA other downstream 913053 18769814 ~ 18771583 (-)
G951233 NA other downstream 1087448 18592818 ~ 18597188 (-)
G951234 NA other downstream 1096893 18585893 ~ 18587743 (-)
G954441 NA other upstream 1375887 21077650 ~ 21078658 (-)
G954484 arhgef4 other upstream 1544251 21246014 ~ 21253309 (-)
G954919 NA other upstream 1877820 21579583 ~ 21579828 (-)
G956234 LOC106578494 other upstream 3051517 22753280 ~ 22756973 (-)
G956366 NA other upstream 3305387 23007150 ~ 23043985 (-)

Expression


Co-expression Network