mtrr (LOC106578438)


Basic Information

Item Value
gene id mtrr
gene name LOC106578438
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 19801737 ~ 19834454 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935134.1
CGGGTAAGTTTTGTAAGGCGTTGAACGTGTTCAGTTATGTATTTTCTACAATGTTAGAAAAGGAGTTCCACGGGGATCTGCAACTAACTTTTCAATTTTCCGATTGTCAGAATGCCTTGTGAGGTGAAGCCCCGGTTCCTGGTTCTGTACGGGTCTCAGAAAGGCCAGGCACAGTCCATAGCCGAGGGGATAGCTGACGAGGCTGAGGAGAGGGGACTGGTTGCTGACATCTACTGCTTGAGTGAAGGAGGGAAGTTTAACTTGGAGAAGGAGAGTGCACCTGTGGTGTTTGTTGTGTCTACCACTGGGGATGGGGACCCACCAGACACGGCCCTGAAGTTTGTGAAGAACATAAAAAAAAAGACCCTGCCCAGCGACCACTATTCACACCTCTGCTATGCTCTTATAGCTCTGGGTGATACAAACTATGAAAATTTCTGCAACTGTGGGAAGACTATTGATGGCCGTCTACAGGAACTTGGTGCTAAACATTTCTACGCAACAGGACATGCAGATGATGGTGTAGGgctTGAGTTGGTGTTGGACCCCTGGCTTGAAGGACTCTGGGAGGCCATCAGAGGAGCGTTATCCAAGATGGCCACCCCTCAGCCTGAGAGGGATGGCCATGTAAGGGACCTGAGAGCATCGTTGAACAAAACACCCGAATTGTCAGTGACAGATGTCAAACTCCACCTCATGAGTCTTAAAGAATCAGAACCTCAGAGCTCTGGCTCACTCAGAACAGCAGCAGAGTCAGAGAGTACTAAGACTGAGCCCAAATCAGCTTCTCTGAATGTTACAGAAGCAGCCTCTGAGACAGGGAGTGCAGTTACTGATGTTAGACCAGTGTCATTGACCAGCAACAATAGGACTGCTCCTAAACTAGATGGTGTTGTCACTGATCCTGAGTCAGTGTTAGAGACACAGAGTGGAGCACCCTCTGCTGTTGTAGAGGCCTCTCTGACATGCTCCTTGCCTCCACTGTCTGAATCTGTCCTCAATGTCCCTGCTCTGCCTCCAGCCTACCTGGATGTCACGCTCCAGGAAGCCACCATAGAAGAAGAGACCAGTGCTCCGGTCAGTAAGGAAACCCTACACGAGGTTCCGATCTCCAGGGCAGTCCAGTTGACCAGAGATGACTCGGCTAAAACAGCCCTTCTGATAGAGCTGGACATCTCGGCCCATCCGATGGCCTACCAGCCTGGGGACTCGCTTGACGTTCTCTGCCCAAACAGAGCCTCTGAGGTGGGGGAGCTTCTCCAGAGACTCTGCCTGCAGGACCAGAGGAGCCACCGTGTCCAGCTCTCACTGCGCAAAGACACCAAGAAGAaagCTGCTCATCTCCCCTCCTACATCCCAGAGAACAGCACTCTAACCTACATGCTCACCTGGAGTCTGGAGCTCAGGACTGTCCCTAAGAAGGCATTTCTTCGTTCCCTGGTAGAGTGTACAGAAGACAGTGGCGAGAGGAGGAGACTACAGGAGCTGTGTAGTAAACAGGGATCAGCCGACTACAACCTCTATGTCAGAGACCCCAGCCTCGGAGTACTGGACCTGCTCAGGGCTTTTCCTGCCTGCCAACCCCCTCTCAGTCTTCTCATAGAACATTTGCCTAAACTGCAACCAAGACCGTACTCGGCGGCAAGctccAGTTTCAGACATCCAGGTCAGCTGCACTTTGTGTTCAACGTCATAGAGTTCCCAGCATGCACTTGGAGACCTACGGGGAGGCAGGGCCTGTGTACTGGTTGGCTCTCTGACCTCGTCAACCCCATTCTGTTGAACCCTAGGAAGGCTCAGCCCTCCACCACCCCGACCCTCCCTAAGGTCTTTGTGAGTCTGCGTGAGAACTGCTCCTTCCGCCTGCCCTCTGACCTCTCAAAACCCCTCATCATGATTGGACCAGGCACCGGCGTCGCGCCCTTCATTGGTTTCCTACAACAAAGggagaaggagagggaggaaaaccCGGAGGCAGAGTTTGGTGAGACCTGGCTGTTCTTCGGTTGTCGCCATAGAGATCGAGACTTCCTGTTTAGAGAGGAGCTGCAGGGGTTTGTGGGTAAAGGAACCCTGAACCATCTGAAAGTGTGTTTCTCGCGAGACACTCAGATGGGGACAGAGACCAAGACAGGTCCTAGATACGTCCAACATAACCTGCTCCTCCATGCCAAAGATCTCACCAACCTCCTCCTCAAGGAGAATGGATACCTCTACGTCTGCGGTGATGCTAAGAACATGGCTAAAGACGTGAACGAAACCCTGATAGAGATGATATCAGCAGAGCTTCAGCTGGATAAACTAGATGCCATGAAGAGATTGGCTGGACTCAGGGAGGAGAAACACTATTTACAGGACATATGGTGCTGAGTGGATGAATCTTCAACATATCTTATGTCACAGACCGAAAAGATCCATATAGAATTTTAGTGGGCCATTCATTTCCTTTAAGCAACACAAGCTGACCATATGCATGTTGTTCCTCTTGCCTCATTGCACCTGACCATAAACTTCATAAACTGACCATAGAAGATTGAGTTTCAAGTACTGTAGTTGTTTTATAGTGGAATTATGCAAGACTAACACACTGCCTGTTTAGCTTACTCCTCATCCTACTTCACATTCTTGTCTTCCAATACTTTTTTTGCTGTGTGCAAAAATGTGTCCAAAATACAAAAGGTGTGTTTGCTTGAAAAGGTTTAAAGGTCTCTGATGTATTTCTTATGCTCACTGTATGATGATAATGAGTGATACCTATCTTGGCACGCGTACAAGACGAGATGAAACCCATTCAGAGATAACGATCAAAGGTAATGCATTTTGATTGATATGGCATGATTGTGTTTTTAATTTGAGAATAATTCAATTGTTCAAGGTGACTTTCCTCACTAGATGAAGCTGTAGTCGGTGGTTAGTTAATTGAAGGATTTTCGCTATGGGCCTTCCACCGTACCCTAGAGAGACTTCTCAGAATTAAATCTTCAGACACTGCTAGTCTTTTTATATCAGCAGGCCTCTCGTCAGGATGGGAGAGGGAAAAGATGTTGACAGTCTCCACAGCTGGGCTAGACTGGGCTGGGGCTCTGTATGAGAATGGATGACAACATCACACTCAATAAAGCTTTGCCAAGTAAACAAA

Function

NR:

description
methionine synthase reductase-like

GO: NA

KEGG:

id description
K00597 MTRR; methionine synthase reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935134.1 True 3139 mRNA 0.49 15 19801737 19834454

Neighbor

gene id symbol gene type direction distance location
phldb2b tcpe coding upstream 15497 19740565 ~ 19799150 (+)
plcxd2 LOC106578441 coding upstream 67438 19725269 ~ 19734299 (+)
chodl LOC106578443 coding upstream 117097 19672943 ~ 19684640 (+)
trnac-gca-2 NA coding upstream 172326 19629340 ~ 19629411 (+)
hgd NA coding upstream 190684 19598451 ~ 19611053 (+)
LOC110536583 LOC106578430 coding downstream 366746 20201200 ~ 20203760 (+)
cbln2b cbln2 coding downstream 661018 20495472 ~ 20499005 (+)
rttn rttn coding downstream 926117 20760571 ~ 20820549 (+)
cd226 cd226 coding downstream 986709 20821163 ~ 20833382 (+)
trpc1 trpc1 coding downstream 1235311 21069765 ~ 21117062 (+)
G952509 NA non-coding upstream 71363 19728483 ~ 19730374 (+)
G952229 NA non-coding upstream 160266 19640641 ~ 19641471 (+)
G952208 ndub4 non-coding upstream 187975 19611791 ~ 19613762 (+)
G952563 NA non-coding downstream 24373 19858827 ~ 19859054 (+)
G952564 NA non-coding downstream 26956 19861410 ~ 19861642 (+)
G952565 NA non-coding downstream 28012 19862466 ~ 19862699 (+)
G952566 NA non-coding downstream 28273 19862727 ~ 19862999 (+)
G952613 NA non-coding downstream 95996 19930450 ~ 19932886 (+)
G951511 NA other upstream 674652 19126665 ~ 19127085 (+)
G948710 NA other upstream 3199845 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 3256448 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 3466445 16327393 ~ 16338373 (+)
tlcd4a LOC106570700 other downstream 2892099 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 3830834 23665288 ~ 23665930 (+)
G956797 NA other downstream 3941318 23775772 ~ 23776845 (+)
G957942 NA other downstream 4766017 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 4960146 24794600 ~ 24795736 (+)

Expression


Co-expression Network