fbxo15 (fbxo15)


Basic Information

Item Value
gene id fbxo15
gene name fbxo15
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 20454780 ~ 20487396 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021620462.2
GTGCAGCCTATCTGTAACCATGACTACTGGACGAAGCTAGACAACTTTTCCGCAGTTTCAGAGAGGGCTTGGATGAAGGCACCGCCAACCGAGGGTAGAGGACCTACAGGCGAAAAGAAGTGCGGAAGTCCTAAAATAAGAAAAATCATGACCACAAAATCCCCGGGCACGAGCCCTCAAAGATGCTTGGCtaccaacaatgcaaaacgtgtGCCACTGACACAGAAAAAGGCCACTGTACCCAGCTGTCCAGTACCAAGCAAGGTACCAACAAAGAGACTCACCTCTCTGCTACCAAGGTCTGCTAGACATGCTGCCAGTGCCAGGCCAGCTGGCTGCACCCAGAACCACATAGAGCATCTGCCACCTGAGATTCTAATGAAGATCTTGTGGAACCTGGATGCCTCTTCTCTCTACTGCATTGGCTACGTCAACAAGCTATTATATAAGCTGGCCAAAAACAATGCAATGTGGCGTAAAATCTATTCTGCAAAATATGGGGAGAGTAAGAAATTGAAGGCCAAGCACATGGACGAGGTTGTGGAGAAGCTGAGTGTGATGAAAGTTCATGAGAGACCAGGGGGCTACTGGAGAAGGCTGTACTTTAGGACCATAGCTGGCTACAACCACACCAAGTGGTTGAAGGAGCTGAGAACCATCAATCCCTTCACAGGCCTTcccagccacacagagagagtccTCAGAGAGCAGCGTGTGGCCTGGGAGATCACAGTGCGTGACAGGTCGGTCTGTGAGGGGACTTTTGAACAGAGCCACACCTACTACAGTGACTCGTCAGTGACATTGTGCTGGACCAACGGTTCATGGCCCGCCTTCCACCAACTCTCTACCATACAGCTTCACGGTGTCAAGAGAGTTCCCCTCAAATGTCCCAGCGCCATCAAGCCAGGCTGGAGGTCTCTGATGGCTCAGTTGGATATTGACACCATCTCTAAGAGCAGCCAGGTGATTGGTGGAGACAGACTGGTCAAGTTGGTGCTGCTGTCGCCAGGCATCGTCATCGGCATCTGGAGGGGCCAGTCGTCCATAgcctttgtgatggccacctTCCACTACCACAGGCTGTTGGAAAGGAGTCTCCTGGGCTCGTCTGTTTGCCCCTACAACATTCCAGAGAACAGGCCTCTTTTTGACGACGTGGACCCAAACTACGGTCTCCATGGTTACACGCTACACattaccctccacaacactgTGACGGAGATCATGTCTGGCCACTTCCCTCAGCTCTTCTGCCGGAAAGGTCAGATCAATGAAGGTTTCATCCAGCTGAATGCCATCATCAGGAGTAACCAGTCTCAGCAGACCCCTCTCTCTGCCAGGGTCAGCCTGCCCTGGAGGTCTGATGCTCTGGAGGGGACTGTGAAGaACTGCTGCATGATGAGCCTGACTCTGCTGGATGAGTCCCAGATACCCTTCTGGTGTGTCAGCACGCCTGTCTCCATGGTGCTGGCCAATGAGGAGCCTTTCTCCTATGACTACCAGGGCCAGCACTTCCTGATCAAGTACAAGGATGCAGAGGGAAAGGTACAGATGCACGTGGTGCTGCTGGAGGAACAGAGACAGTTCTTCCTTATTAATCTGGTTGTCTACATCAGCACAGTCAAAGTCAACCAGCACTTTGGGAGAGCCTATTAAGGCGACTGTTTAGGGGGTACTtttcccgtctgtatcaagaatggtctgcaacccaaaggacatccagccaacttgacataattgcaggaagcattggagtcaacatggcccagcatccctgtggaacacttgacaccttgtatagttcatgccccgatgaattgaggctgttctgagggtataaggggggtgcaactcaatattaggaagatgttcttaatattttgtacactcagtgtatatacagtgcattcggggaagtgcaccagtccctactgcagcaaagcaccctggggatgtgatgaaagaaataaaagctgaaataaatcattctcccttctattattctgacatttcacattcttaaaataaagtggtgatcctaattgaccaaagacagggaatttttaccaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtctgtaaacgtgtgacttcaactgtacttccgTCTGAAGGCATATACTTCCGCGTATGCTGTGCATTGCTACCGAaccaaaaaataaaacaaattgaatAAGTCAA

Function

symbol description
fbxo15 Orthologous to human FBXO15 (F-box protein 15).

NR:

description
F-box only protein 15-like

GO: NA

KEGG:

id description
K10298 FBXO15; F-box protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021620462.2 True 2233 mRNA 0.49 13 20454780 20487396

Neighbor

gene id symbol gene type direction distance location
neto1l neto1 coding downstream 135413 20135248 ~ 20319367 (-)
timm21 timm21 coding downstream 321004 20130518 ~ 20133776 (-)
si:dkey-118j18.2 LOC106578436 coding downstream 335995 20107279 ~ 20118785 (-)
sema5a LOC106578437 coding downstream 370395 19890577 ~ 20084385 (-)
LOC110535450 tcpe coding downstream 655592 19794126 ~ 19799188 (-)
LOC110535458 LOC106578426 coding upstream 255930 20743326 ~ 20747932 (-)
dok6 dok6 coding upstream 348109 20835505 ~ 20916389 (-)
LOC110535463 chst2 coding upstream 576652 21064048 ~ 21066774 (-)
pcolce2b pcolce2 coding upstream 630478 21117874 ~ 21130446 (-)
LOC118937470 NA coding upstream 714149 21201545 ~ 21202468 (-)
G953602 NA non-coding downstream 50262 20404226 ~ 20404518 (-)
G953597 NA non-coding downstream 57566 20396973 ~ 20397214 (-)
G953591 NA non-coding downstream 64591 20389931 ~ 20390189 (-)
G953579 NA non-coding downstream 79194 20375327 ~ 20375586 (-)
G953549 NA non-coding downstream 117790 20336109 ~ 20336990 (-)
G953607 cbln2 non-coding upstream 8787 20496183 ~ 20498904 (-)
G953689 NA non-coding upstream 71399 20558795 ~ 20559468 (-)
G953692 NA non-coding upstream 75315 20562711 ~ 20563178 (-)
G953699 NA non-coding upstream 81963 20569359 ~ 20569617 (-)
G953726 NA non-coding upstream 138917 20626313 ~ 20626578 (-)
G952255 LOC106578453 other downstream 1040044 19401554 ~ 19414736 (-)
dap dap other downstream 1591005 18849188 ~ 18863855 (-)
G951713 NA other downstream 1683197 18769814 ~ 18771583 (-)
G951233 NA other downstream 1857592 18592818 ~ 18597188 (-)
G951234 NA other downstream 1867037 18585893 ~ 18587743 (-)
G954441 NA other upstream 590254 21077650 ~ 21078658 (-)
G954484 arhgef4 other upstream 758618 21246014 ~ 21253309 (-)
G954919 NA other upstream 1092187 21579583 ~ 21579828 (-)
G956234 LOC106578494 other upstream 2265884 22753280 ~ 22756973 (-)
G956366 NA other upstream 2519754 23007150 ~ 23043985 (-)

Expression


Co-expression Network