XLOC_028361 (dusp16)


Basic Information

Item Value
gene id XLOC_028361
gene name dusp16
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 107287 ~ 119689 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055093
GGTTTTCTGTGGATGCAGATCAGCGGGCGGCGGCTTCTGTCCTCCCGCTCGGGTGTGCTCCGGCTGGGCTTCAGTTCTCAGGGTTTCTCGCTGTGTTTGGAGAGTTTGAGGCCGGCGAGTTTCAGTGACGCCATGATGTTATTTATACCCGATGAGCTCACGAGCGCCGAACTCGGTAACTTTAGCACAACACGACCGGACGGCGCTGACTAGCATAACTAGCGGCCCTCTCCACTGGTTTACCCGCTCGTCTGTGGATTTACTGGAGAATGAGACCGACTGGAGGCTTCACGGATCTGATCATGATGAAGTGCAGTGGTGAGGATCTTCCTGAGGTCACGATGCTGCTGAACGTCTGTATGGAGCCTGGAGCAGTCTGAAGAGTctctcattacacacacacacacacacacacacacattaacacaaactcaaacacactcacacacacacacacacacacactcacacacacacacacacacacacacactctctgtccctcatctgtgtgtgtgcgctccgCTGAGGCCGCCGTGGGGGATTGTGGgtatgtgtgagcgtgtgtgcgGCGCGCGGCCCATCGGCCCGCAGGCTCTGGTGGCGCTGCTGGAGGGCCGGGTGGAGCGGGTGCTGCTCATCGACTGCAGGCCCTTCGTGGAGTTCAACTCCTGCCACATCCTGGAGGCCGTGAACATCAACTGCTCCAAGCTGATGAAGAGGAGACTGCAGCAGGACAAGATCCAGATCAGCGAACTGCTGCAGCACTGCGCCAAGAggaagctggAGCTCCAGGGTCAGGAGGTGGTGGTTTATGACCAGAGCTCAGGTGACCCCGCCTCCCTCTCACCGGATGCCTTTCTCAGCGTCCTGTTGGTCAAGCTGGAGAAGAGTTTCCCATCAGTCCACCTGCTCTcagggggTTTCCTGCAGTTCTCAGGGCTGTTCCCGGGTCTGTGTGAGGGGAAGTCTGCGCTGGTGCCGTCCtgtgtgtctgcagtgtgtgtgtcgGTCAGCAGCGCCGGGCCCACGCGGATCCTGCCACACCTGTACCTGGGCTGCCAGCGGGACGTGCTCAACCAGgagctgATGCAGCAGAACGACATCGCCTTCGTGCTGAACGCCAGCAACTCCTGCCCCAAGCCAGACTTCATCCCGGACACACACTTCCTGCGGGTGCCGGTGAACGACAGCTTCTGCGAGAAGATCCTGCCGTGGCTCGACCGCTCCGTGGAGTTCATCGAGAAAGCCAAGGCCAGTAACGCCAGAGTTCTGGTTCACTGTCTGGCGGGAATCTCCCGCTCGGCCACCATCGCCATCGCCTACATCATGAAGAGGATGGACATGACACTGGATGAAGCGTACAGGTTCGTGAAGGAGAAGCGGCCGACCATCTCTCCCAACTTCAACTTCCTCGGGCAGCTGCTGGACTTCGAGAAGAATCTGAAGAGTGTCTGTGACCCGCAGCGAGCGGCCGAACCCAAGCCCGGCGTGTCGGATCTGCTGGAGCCGCTGACGCTGCCCTGTGTGCTGAGCGGCGTCTCTGAGGAGCGTCTGCTGGCCCGCGCGCTCTGCGGACTCACGCTCGGAGAGGACCTGAAGGAGAACACCCGGCCCAAGCGCTCATTCTCTCTTGATATTCAGTCGTATGGCGAGCCGGCGGCATCTGTGCGGGCGTTTCCCATCAGTGCGGACAAACCTGGCTGCCAGTTCTCCCCGGTGCAGGAGGTTTCAGAGCAGAGTCCGGATCAGGAGCGGGCTGAGGACAGTTCTGCGAGACCCTGGGGTACGCCAGCGCTCCAGCGCAGCGGCAGTGTGGATGAGTCTCCGCGTCCGGTCGGCGCGCTGAAGGGCTGGCACTCAGACATGCTGCTTGGGCCGGTGAGCGGTGGCTGGCTCCTGCCCCCTGACCTCTACCCCGGCCCTGGTGGGTCCCCGTACGGCTGCGCCGTGGGACTGGAGGCGGTGCGGCGGCGCGGGCGGCAGCGCAGCGGGGACACAGGAGACTCTCGCCGCAGCTGGCACGAGGAATCCAGCTTCGAGAAACAGCTGAAGCGCCGCAGCTGCCAGATGGAGTTCGGGGACGGCGGGACTGACAGCCGATCCAGAGACGACACCGCAGCCGGCCAGACCAGCTTCAGCGGCAGCATGGAGATCATAGAGGTCTCCTGAGGAACACTCTCTCATGCTGATCACACACACGGACACTGTTGGAGCAGTGCTGCTTGGTGACTTTTCCATTATTATTCCTGATTAGTCTCACCTGGCTGATCATTCCCCAGAGTGACCCGGCTGCATTGCTCAAAGGTTGCCCTGTGCATCGTCAGCAGAACTCTGCTGGTCTCTGGTTCAGACTGAAGCTGGAGTGTCCTGACGCCAGCCCAGCTGCGGTGCTGAATCCAGGAGACTCGATTCTCAACCCATCAGGAGATGTTCTGAATGTAGGGCCGCGCAATACTGGAGGAAACTGACGATCGATGTTTGATTCTTCTGCGATACGCATTGACTATATTTTCTCCTGATGACATGAACGCCTCAGGAACTCATCATGCTAGAGTGATTGATGATAGATGTAGACTGAGCGCATCTGCACCCCATACAGCACACGGATCAGCACAGTAGAGCACAGAGCAGTCTATTAGCCGTGCTGTTCAGACACAGCAGCTGTACAGTCAGATGTAGAGTAAGTCTTCACAGTCTGCAGAGGTCAGCGTTTCAGGGGATCGACACAGAGGGCCGGACAGATGCTGCTGTTGGTTTTGATCCTCTCCACATGTTGGCTACTGCGTGCTGTAATGTATTAGCCTGAACGCTTTACACTGGCCTGAGACGCTCACACAGCTGCAGGCCGTAAACACATGCGGATCATCACTCACCGGACAGCTGATGGGTAACCTCTGCAGATCATTGATCATCCACACTGAGCGTCCTGCGCTGTGATGCTGCAGATGTGCACATGGTGGATGCTGGAGGAATATGTCCTGCAGCCCTCACTGATGCACCGCTATTCTGCCTTTAATGATTCAGATTTTCCTTttcaccagcagatggcgctgtatgcATTACAAACAGCCTTCAGTTCCTCGCACACGCCTCTCATAAAGTCACCATACCTAAAATAGTCATTACTATTATTAACGTTAAAGTTAATTAACGCTCTCCTGGACTGCCGTCTGCTGGTAAACACTAGCTTAGAGCATCTTCTACTGGTTTGGAAACTATCATAGCGCACCCTcctaaactagcctagagcattttctgctgttcaaaactagcctagagcgccatctgctgtttcaacactagcctagagcggcatctacTGTTTCGACACTAGCATAGAGCGGCATCTGCtcttaaacactagcctagagcattttATGGTGtttaaagctagcctagagcgccatctgctgttaaaaactagcaaagAGCACCATCTACTGCTTCGAAACTAacatagagcaccatctgctgttaaacactagtctagagcgccatttgctgtttCAAAATTAGCCCAAGACACCATTTACTGGTAAACGCTAGCCTACAAACGCCGTCTACTGTTTGGAAACTATCATAGAGCGCCCTCttaaactagccaagagcaccatctactgtttcgaaactaacctagagcacaaTTGGCTGTTAAACGCTTACCTAGAGCACTCTCTGCTGTAAAATGTtagcatagagcaccatctactgttttaCAAATAGCATATAGgatatctgctgttaaacactagcatagagcaccatctgctgtttcaCAACTAGCCGAAAAACCGCCTGCTGGTAAACGCTAGCCTACAAACGCTATCTACTGTTTCGAAACTATCCTAAAGCACCctcttaaactagcctagagcattttCTGCTctttaaaaccagcctagagcgccgtctgctgtttcaAAACTAACatacagcaccatctgctgtttaacgctagcctagagcgccgtctgctgttttaAAATTAGCCCAAAACACAGTGTACTGGTAAACGCTAGCCTACAAACACCATGTACTGTTTGGAAACTATCATAGAGCGCCctcttaaactagcctagagcattttctgctgtttaactctagcctggagcgccatctgctgttacacTAATGTCCATTGCAGAGAGGATCGCCATACATTCTGAAAATGTAAGAAGTAATCGATAAGCCTCAGTTCACCGATGAGTCGCCTGACTCAGAACACTTCCTCATATAAACAAACCATCAGAATATAGATGTAAACAAACCGTAAATGATGGTGATTAAGTCAAGTTCGGGTTATGTTTGTGCTTCAGAAGTGGAGATTtccttaaaataaactaaaataattcagAATGAAGGAAGCAAAGCACACCAAGACCAGCCGCCTGTGGGAGATGATCTGCACCGACAGGAGCTGTGGTCTCAGGAAGTCCTGTTGATctggagtcacacacacacacacacacacacacacacagagactctCTCCTCATTCAGAACCCGTCCGCCGTTCACACACAGCTCTGAGACACTGTTGGTTTCCTCCACTGGTGCTTTACTGTGGACTCAGAGCAGTGCTGATGCTCAGACTCTAGAGAGACATGCTGGCCTGAGATCAGTGCTTATTCTGCATCTGAGGGTCAGCGGTGTGAGTGCCATAAGGACTCTTCAGACTGATcagcagatgatgatgatgatgatatagaACACTAACGCTGTGAAATCACTCACATTACTGAGGATATGATCATTGAGGTATTCTGAATCCATGATGACCCGCCGTGTTCAGAGTGTGAGAtcaacagccgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgctcgttcTGCAGATGTGGATCAGTAGCAGGTTATtgattgctgaaataaaacaccaATGGTACTTGA

Function

symbol description
dusp16 Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity; mitogen-activated protein kinase binding activity; and protein tyrosine/threonine phosphatase activity. Predicted to be involved in peptidyl-threonine dephosphorylation and peptidyl-tyrosine dephosphorylation. Predicted to act upstream of or within dephosphorylation. Predicted to be active in cytosol. Orthologous to human DUSP16 (dual specificity phosphatase 16).

GO:

id name namespace
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0006470 protein dephosphorylation biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0035970 peptidyl-threonine dephosphorylation biological_process
GO:0016311 dephosphorylation biological_process
GO:0005829 cytosol cellular_component
GO:0005737 cytoplasm cellular_component
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0016791 phosphatase activity molecular_function
GO:0051019 mitogen-activated protein kinase binding molecular_function
GO:0008330 protein tyrosine/threonine phosphatase activity molecular_function
GO:0004721 phosphoprotein phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2360 Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity; mitogen-activated protein kinase binding activity; and protein tyrosine/threonine phosphatase activity. Predicted to be involved in peptidyl-threonine dephosphorylation and peptidyl-tyrosine dephosphorylation. Predicted to act upstream of or within dephosphorylation. Predicted to be active in cytosol. Orthologous to human DUSP16 (dual specificity phosphatase 16).

Ensembl:

ensembl_id ENSDARG00000102474

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055093 True 4927 mRNA 0.53 7 107287 119689

Neighbor

gene id symbol gene type direction distance location
XLOC_028360 NA coding downstream 5910 99991 ~ 101377 (-)
XLOC_028359 NA coding downstream 32679 73430 ~ 74608 (-)
XLOC_028358 NA coding downstream 34629 71463 ~ 72658 (-)
XLOC_028357 NA coding downstream 42584 56025 ~ 64703 (-)
XLOC_028356 CU856344.1 coding downstream 53917 48519 ~ 53370 (-)
XLOC_028363 gpr19 coding upstream 9008 128697 ~ 133492 (-)
XLOC_028364 tbk1 coding upstream 14723 134412 ~ 149334 (-)
XLOC_028365 eps8a coding upstream 31817 151506 ~ 178510 (-)
XLOC_028366 ptpro coding upstream 65174 184863 ~ 193762 (-)
XLOC_028367 ptpro coding upstream 70858 190547 ~ 211714 (-)
XLOC_028354 NA non-coding downstream 94947 6163 ~ 12340 (-)
XLOC_028373 NA non-coding upstream 273862 393551 ~ 396819 (-)
XLOC_028375 CU855889.2 non-coding upstream 581923 701612 ~ 734347 (-)
XLOC_028376 NA non-coding upstream 604141 723830 ~ 732484 (-)
XLOC_028383 NA non-coding upstream 780273 899962 ~ 904022 (-)
XLOC_028385 NA non-coding upstream 800063 919752 ~ 921761 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000322_00136232_00142042 NA coding CI01000322 null 136232 ~ 142667 (+)