nrros (LOC106578474)


Basic Information

Item Value
gene id nrros
gene name LOC106578474
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 21351702 ~ 21357076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021620487.2
TTCCGTTGCTTGCCTGCTTCCGCAAATACTAAAAGCACGGCTCGGCTATGTAGAGAACACACACCGCTCCACATAGATGAGAACCGACCGACGCTGCGTCGAACAAACCAGAGAATATGGTCAGGAGCTCAACCGTCAGTGGCTTGAATAACACACACCTAACCACCAGCtGAGGATGTTAAGATGCCCATCCAAGGCCTACTCCCTACCCTGGTCTGTCTCACCATCTGGACCCTGTGGAGCCTGCTAATACCTGCCCTCAGCCACCCTCACCACAGCCTCTGCAGACTGACCCAAAAGATTGCTCTCTGTAGTGATAGTGAGATCTCATCTGTGCCGAGGGACCTACCGGACAACATAGAGGAACTCCACCTGACCCATAACCACATTCAGATGCTACAAGATGACTCCATCTCCCGCTACATCTCCCTTCGCACTCTAAGCTGTGCAAAAAACCGCTTGGAGACAGTGGGGTCAAAACTCTTTCACAACTCACCTCATCTAGAGAGCCTCAATCTAGCTGCCAACCAACTTCACATTGGATACCAGGAAACTAGCAGGGCACTGCTCACCCTGTCTAGACTCAAAGTTCTGGATCTGTCAGAAAACCAGCTTACAAACGACATAGCTTCGGTCCTCCTCCAGAATATGACGTCCCTGGAGTACCTCAACCTTTCCAGGAACCTCCTGCTGAGGCTGGACGAAAGTTCCTTCAGCGacctccaccagctcagagagcTGGACCTACAGAGGAACATGCTGTTTGAGATCGTTGATGCCTTTGACCACCTGCACAAGCTCCAGAGACTAAACCTGGCCTTCAACCACCTGGCCTGCCTGATGGACTTCGACATGACCCAACTCGTGGTGCTCAACGCAAGTCACAACAACATTGAGTGGTTCATAGCCAACCAGGACCTCCAGGAAACTTTCCAGCTGGAGACCCTGGATCTCACCAACAACAACCTCCTTTTCTTCCCCTTCCTTCCCATCCAGAGCCGCCTGAGGAACCTCCACCTGTCCCAGAACAGAGTGAGCTTCTACGAACACCTGGCAGACACCGCTGGCTACCCAAACTGGACCAACAGTGTCCAGTTCTTCAACCTGAGGGGCAACGTGACCAATGTCACAGCCCAGCTGTGGGACGAGAGCCTTCACGGTGACATCTCCTCTCTAGACCTGCTGGATCTGAGTGGAAATCAGGTGGGCTACTTCCCCCAAGGGTTTATCAGCAAAATGCCTAGCCTGGTCAGGCTCAGGATGCAGACAAACTGTCTCGAGGTTTTAAATCTAACACTGGAAAAACTTCCAGGGACGTTGTACGAGTTGGATGTGAGCAACAATAGATTGACGGAGCTCCATGCTGACCAAGGTAGTTTAAGTGAGTTAGGAAAACTGAGCTATCTCAACCTGAGCCAGAATGACCTGCAGAGTCTACCTCCTAGACTGTTCTCCTCTCTCACCAGCATCAGCTCTGTGGATATCAGCTTTAACAGAATTGGCATATGCCCCCTTGAGGAATGGGGCGGGAACAGAGGTGGGGGTAACCAATCAGACTGTGTTGTTTGGAGAAACATCATCTCTCTGAGACAGCTCCACCTATCAGGGTGCAACCTGGGGAGACTGCCATCGTCAGCGTTCACAGGGACACCTCTAACACACCTGGAGCTGTCTAACAACCCAGAACTCAACATTGGGCCCAGATCGATAGTAGGCCTCAGCAGAACTTTACACCATCTAGGTTTGGGAAACACAGGCCTGAGAGACTTTGACTTCTCCCCTTTCCACCACTTAAAGTCTTTGAACATTTCCAGAAACTCTCTAACTCAGCTCCCTGCTTCACTGCAACGCCTTGAGCTGAGGCTGCTGGACCTGAGGGACAACAAACTTAACACTGTCCCCTCAGATCAGGCTAACACATTAGCCTTGAAACTACGGACTGTTTTTCTTAATGGAAACACTTTCAACTGCTGCCAGTTGGACTGGTACAGGACGTTTGAGAGGGCGAAAACGGTCAATATCATCGACCTCTCAGACATTTCATGTCAGGATCTGACAAAAAATACACACAAAGTGGTGTTTTTAGACCCTTTAATGTGTGGTGGGAGTGAGGAGGAGTCTGTATACTGGTACATCCTGTTGTTTATCGTACCTGTCCTCTGCCTGGTTGGGATTTCTGTCATCTTCCTGCTCACCTTCAGGCCCAGACTGCTTCCCAAGGCCATTAAAAATAAATGCCGGAGGCCCACGTCATACTGACATTTCAGTCACCTTCCCTGTGTTGTGGGCGAAAGGTCAAATGATTAAGACAATGTGGTACATTCTGTCCAAGTGTGATGTTTTGCGAAtgggtcgttccatgtcatttcagcaagtcATGACatccaccatctcagattgttctgaaatcgtttctgtagttagaaacagatacggggtggcagatagcctagtggtttgagcgttggactagtaaccgaaggt

Function

NR:

description
negative regulator of reactive oxygen species-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021620487.2 True 2484 mRNA 0.50 3 21351702 21357076

Neighbor

gene id symbol gene type direction distance location
fbxo45 LOC106578473 coding upstream 3830 21345476 ~ 21347872 (+)
LOC110535467 arhg4 coding upstream 25964 21247823 ~ 21325738 (+)
LOC110535465 LOC106578468 coding upstream 202393 21131483 ~ 21149309 (+)
trpc1 trpc1 coding upstream 234640 21069765 ~ 21117062 (+)
cd226 cd226 coding upstream 518320 20821163 ~ 20833382 (+)
LOC110536585 vav3 coding downstream 66348 21423424 ~ 21550872 (+)
col11a1a col11a1 coding downstream 858783 22215859 ~ 22304517 (+)
olfm3a olfm3 coding downstream 969013 22326089 ~ 22356408 (+)
LOC118937330 NA coding downstream 988917 22345993 ~ 22349256 (+)
LOC110535481 LOC105022597 coding downstream 1035319 22392395 ~ 22405735 (+)
G954106 NA non-coding upstream 14570 21335163 ~ 21337132 (+)
G954059 NA non-coding upstream 148360 21199974 ~ 21203342 (+)
G954060 NA non-coding upstream 149552 21200059 ~ 21202150 (+)
G954048 NA non-coding upstream 174589 21175909 ~ 21177113 (+)
G953836 sh3glb1 non-coding downstream 19029 21376105 ~ 21395909 (+)
G954194 NA non-coding downstream 142315 21499391 ~ 21501315 (+)
G954212 NA non-coding downstream 187825 21544901 ~ 21552937 (+)
G954709 NA non-coding downstream 220059 21577135 ~ 21577541 (+)
G954710 NA non-coding downstream 220528 21577604 ~ 21577865 (+)
phldb2b tcpe other upstream 1582349 19740565 ~ 19799150 (+)
G951511 NA other upstream 2224617 19126665 ~ 19127085 (+)
G948710 NA other upstream 4749810 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 4806413 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 5016410 16327393 ~ 16338373 (+)
tlcd4a LOC106570700 other downstream 1369477 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 2308212 23665288 ~ 23665930 (+)
G956797 NA other downstream 2418696 23775772 ~ 23776845 (+)
G957942 NA other downstream 3243395 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 3437524 24794600 ~ 24795736 (+)

Expression


Co-expression Network