XLOC_028362


Basic Information

Item Value
gene id XLOC_028362
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 116322 ~ 119194 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057304
AGCTCGGGTTAAGTTTGTTGTCGGATACACGGCGTGATGTTGttgatgtttgtgtgtatgtagtgATGACAGGAACGCTaaaacTACTTGCACAATGCATTAGAGTGCAGTAATAATGTGTTGGAAATGTAGTCCGGCTTATTTAGAGCAAAGAGCCTTTTTATTTGAGTGTTTAACAATTTAAGAGTGTAAAACAGGAGAATCATCTGATGGAGAACGATGTAGCCGATGGGGAACGATGGAGCTGATGTAGCCGATGGGGAATGATGAAGCTGATGTAGCTGATGGAGAACGATGGAACTGATGGATAACGATAAAGCTGATGGAGAATCATCTGATGGAGAATGATGGAGTCGCTGGAGAACGATGGAGCTGATTGAGAATTAGTAGATGGATATTGATGGAGCTGATGGAGAATGATGGAGCTGATGGAGAACCATCTGATGGAGCTGATGGTGTATGTCCTGCTGTATAGGCTGACCTCCAGGCTCCCTCGGCTGGTGTTCTGTCAGTCAGTGTTGCTGTTGGTGGAGTTGGAGCTCCATCAGTGTCTCGTCATGAATCCTCCATCAGCTAGACGGAGCGGTGTCTGCTCTGTGTGTTCTGCTTCATCTGTCCACACTTCAGTGCTCTCCACCTCCACACGCTGGTCTTCCCCACACTCACTCCACCCGGCTCAGGGTCAGAGGCAGGAGGATGTGCTGAGTCTCTGTGCATCTGGAGGAGAGCAGTCGTGTCTGTTGATGGAGGAGTGTGTTGAGGTGTCTACAGATTCCTCCAGTGATGTAGATGTTGGAGAGTCTGCTGAAGCTCCACATGATGCTTCACACTGCTCTGCTTATTCCTGTGGGTTGGAAAGCTGTGGTGTGTTCCTCAGGTGAATAATCCTGTCGTTATTCCTTCAGCCGACGTCTTCAACGCTCTTCAGTTTGGGCGGTGTGTGTCAGATGAAGTGTGcgtacagaaacacacactctgGAGGTCACTGTGAGTTACAGATGTTCTGATGCGTCTGATTAATAATTCACAcctttattattatattcactCTACTGATAAAACACCGACCGACAGTCCAAACcagcactctcacacacacatgtagag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057304 True 1107 lncRNA 0.47 3 116322 119194

Neighbor

gene id symbol gene type direction distance location
XLOC_028360 NA coding downstream 14945 99991 ~ 101377 (-)
XLOC_028359 NA coding downstream 41714 73430 ~ 74608 (-)
XLOC_028358 NA coding downstream 43664 71463 ~ 72658 (-)
XLOC_028357 NA coding downstream 51619 56025 ~ 64703 (-)
XLOC_028356 CU856344.1 coding downstream 62952 48519 ~ 53370 (-)
XLOC_028363 gpr19 coding upstream 9503 128697 ~ 133492 (-)
XLOC_028364 tbk1 coding upstream 15218 134412 ~ 149334 (-)
XLOC_028365 eps8a coding upstream 32312 151506 ~ 178510 (-)
XLOC_028366 ptpro coding upstream 65669 184863 ~ 193762 (-)
XLOC_028367 ptpro coding upstream 71353 190547 ~ 211714 (-)
XLOC_028354 NA non-coding downstream 103982 6163 ~ 12340 (-)
XLOC_028373 NA non-coding upstream 274357 393551 ~ 396819 (-)
XLOC_028375 CU855889.2 non-coding upstream 582418 701612 ~ 734347 (-)
XLOC_028376 NA non-coding upstream 604636 723830 ~ 732484 (-)
XLOC_028383 NA non-coding upstream 780768 899962 ~ 904022 (-)
XLOC_028385 NA non-coding upstream 800558 919752 ~ 921761 (-)

Expression


Co-expression Network