LOC118937334


Basic Information

Item Value
gene id LOC118937334
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 23475135 ~ 23477150 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034600.1
cagcccggggcctacggcgaggatccgcagtccagagcctaCGGCAATGATCCACGAGTCAGTGCTACAAGAGCGGACTCAGTGTAAAGAAGGGGGGCggcgtccagaaccagagccgccaccgaggttagatgcccacccagaccctcccgtttagGTGAGGCACAGCAAATATATAGCCTGTATGACATCCAGCCCTGATGTCCCCTTTCCTTTTCCCCTGTGATCCAGaaaagcCTCAGGATTCTTCAGGatatggactctacaaagtgttgaaagcattccacagggatgccggcccatgttgactccaatgcttcccacagttgtgttaagttggctgaatgtcctttgggttgtggaccattcttgata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034600.1 True 375 mRNA 0.54 3 23475135 23477150

Neighbor

gene id symbol gene type direction distance location
LOC110535498 NA coding upstream 87842 23381529 ~ 23387901 (+)
snx7 snx7 coding upstream 109136 23329750 ~ 23365999 (+)
ptbp2a ptbp2 coding upstream 508332 22951161 ~ 22966803 (+)
LOC110535493 LOC106578494 coding upstream 718158 22750723 ~ 22756977 (+)
tlcd4a LOC106570700 coding upstream 733872 22712577 ~ 22741263 (+)
LOC110535500 LOC106578508 coding downstream 17759 23494909 ~ 23531354 (+)
palmdb LOC106578510 coding downstream 86525 23563675 ~ 23604917 (+)
LOC118936499 LOC106578510 coding downstream 113689 23590839 ~ 23594014 (+)
LOC110535501 LOC106578509 coding downstream 158749 23635899 ~ 23661525 (+)
LOC110535505 LOC106578511 coding downstream 189572 23666722 ~ 23675483 (+)
G956597 NA non-coding upstream 58846 23412325 ~ 23416289 (+)
G956569 NA non-coding upstream 104572 23370317 ~ 23370563 (+)
G956564 NA non-coding upstream 115267 23358901 ~ 23359868 (+)
G956507 NA non-coding upstream 191570 23283357 ~ 23283565 (+)
G956657 NA non-coding downstream 15922 23493072 ~ 23493446 (+)
G956682 NA non-coding downstream 67344 23544494 ~ 23544728 (+)
G956732 NA non-coding downstream 200930 23678080 ~ 23681424 (+)
G956739 NA non-coding downstream 211125 23688275 ~ 23688480 (+)
G956744 NA non-coding downstream 220629 23697779 ~ 23698068 (+)
phldb2b tcpe other upstream 3705782 19740565 ~ 19799150 (+)
G951511 NA other upstream 4348050 19126665 ~ 19127085 (+)
G948710 NA other upstream 6873243 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 6929846 16543682 ~ 16565783 (+)
G956728 LOC106613263 other downstream 188138 23665288 ~ 23665930 (+)
G956797 NA other downstream 298622 23775772 ~ 23776845 (+)
G957942 NA other downstream 1123321 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 1317450 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 3236475 26713625 ~ 26797294 (+)

Expression


Co-expression Network