waca (LOC106590019)


Basic Information

Item Value
gene id waca
gene name LOC106590019
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 27357766 ~ 27401629 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935253.1
TTTAGCCCCACAGTTTCCCGGATGTAGTGGTGGGAGGGAAGCGGGTGGTTTGCAGCCTGAGCTTCGCTTTTTGGTAGATAGGGGCAGTTGGTGTTTGCGAGTGGGAGATGGACCGTGAGCCCTCTTCTGATTAGCGAAGCCGAAGAGCTCCTCAAAATAATCAGAACTATTGAAATAATAGACGAGAACGGGTTgctgaaataaaaatacaacatATAACTTAGTCCATCTTTCACatccactccacacacactaacacgGCATTGATGGTAATGTATGCAAGGAAACAACCGAGACTCAGCGATGGGTGCAACGACCGAAGGGATTCACAGCCCTACCAGACGCTCAAATACTCGTCGAAGAGTCACCCCGGTGGTGATCATCGCCATGACAAGATGCGAGACACCGCAGATGCCACTCCTCCATGTAAAATGTATCGTCGATCTGACAGTCCTGACAACAAACACATCGATAACTCGGGGCATGGCAGGGCAAAGGCAGTCCACACGCACCGggccagagagagggatggagGGACGAGTTATTCTCCACAGGAAAATTCACACAACCACAGCACACATCAAAGCAGCTCCAATTCACATTCAAACCCCAGCAAGACATCAGACGCAcctTGTGAAGATAAAGATGACTGGTCAGAGCACATCAGTTCCTCTGGGAAGAAGTACTACTACAACTGCAGAACAGAGGTGTCACAGTGGGAGAAACCCAAAGAGTGGCTGGAGAGAGAGCAGAGGCAGAAGGAGTCCTGCACTAAGTCGGCGCCAGTCAACAGTTTCCCCAAAGACAGGGACTACAGACGGGAGGCCATGCAGCAGGCTACAGCACTCACTGGCTTTACTGCTGCTAaGTCAGCCCAGGTGGAGAAGCAGCCAGCGTCGGTGTCTTCACAGTCGTCCTCCTCAGGCTCGGTCCTGAACCCCACGTCGGGTACCCCCTGTTCCTCCTCAGCCCCCACCACGGTGCCGGTGTCCCCGGTCTTGCAGTCCCACGCCCATACCCCCCTTCTCCAGGACCCCTCCCTGCTCAGACAGCTCCTCCCAGCACTTCAGACCGCCTTGCAGCTCAACAACGCCAGCGTCGACATGGCCAAGATCAacgaggTCCTCAAAGCTGCGGTCACCCAAGCGTCGTTACAGTCGTTGCTTCATAAGATCCTCACGGCCGGCCCGTCGGCCTTCAACATCACCACTCTTCTCTCCCAAGCAGCCCAGCTCTCCAACCAAGCCCAGCAGTCGAACCAGTCCCCCATGTCCTTGACATCAGACGCCTCCTCTCCCCGCTCCTACGTGTCTCCCAGGATCAGCACGCCTCAGACCAACGCTGGTCACCACAAAGCCCTGCTCAGCACGCCGCCTGTCACCTCACAAACCAAGGTGAGCAACACGCCAGTTGTGAAGCAGCAGGGATCAGTCCCCCAGCCCTCCCCCCAGCAGCCCCTCCCCAGCGACAAACTGCACGGACACGACATAGCCGCCTCCCCAAGGACCCTCCAGCGCCAAGGCAGTCAGAGGAGTCCGTCCCCAGGTCCCAACCACGCCCCCcccagcagtagcagcagcagtgcccccaccaccacctccacaccctccagctcctccacccgGCCAGCCTCCTGCTCCTTCACCCCAACCCTAGCGTCACACTTCAACGAGAATCTCATCAAGCATGTCCAGGGCTGGCCCGCCGACCACGCAGAGAAACAGGCGTCCAGGCTACGTGATGAGGCCCACACCATGGGAAGCATCAACATGTCTGAAAATTGCACCGAGCTCAAAAATCTGAGATCCTTAGTTCGAGTCAGTGAAATTCAAGCGACATTGCGCGAGCAGAGGATATTATTTTTGAGACAACAAATTAAAGAACTTGAAAAGTTGAAGAATCAGAATTCCTTCATGGTCTGAGGACTTGACttgaagagaggaaaggggggagagaccCATTGCACATGGTTGGAAGAGAGCTCTTGGTTGGGAGAACCATTGTGTTCTTGTTCTGTGCCCAGTCTTAACACTTTTGAGCTGCAGTTGGATTGGCTTTGGACCACTGGACTGGGCTTTGAGAGGGCTTGGTTAGGTGGAGAGAGTGAGTGGTTGATGGTTGTTGTGGAGGAGAAGAGCGGAGAgaagggttagacatggcttgcatcccaaatggcacccttttcaaTTTATACTGCGCTACTTTTGAACGGGGCCAACAGGACGCAATCATGGTTGGTTTTTGTGCCCTGGAGATGTAGATTTCTTGTAGATGTCATCCATGTTGTAAATATGTTTTGTAGATGACTGAAGCCATGGAAAGCCATGTTTATCAAAGCTTTTGACATCCAAACGAGTCAACGTTATGCCCGAGGAATCAACAGCTTCAGTTCATAGCCTTCTTCATGTTAAACGCATCAGTTgggatatgtcccaaatggcaccctattccttatatagtgcacactattccctatatagtacactacttttgaccggaaccctatgggccatggtcgatagtagtgcactaaatagggaatagggtgccatttgggacaaaggcaCTCAGTCTGCAGACTTCAAGCTTTTTTGTTAATAGATCAGTGAACCATTGCCTTGAGCATGTCTGTGACCTATGACCTGCATGGAACTGGAAGTTAGCGTTATAATAACtgaaacataaaaaaataccGTAACGCAAACAAAACAAACTCACGTTTTAATTTTCTAGTTTTCTCTGCTCttgcataataataataataatgctctATGGATGAAACCCAGTCATATTTGACGAATGTATTACCCTCTGGTGGAAGTATTAaggttacacaaacacacacgatgtctctcaaatggcacccttttccctttatatGCCAGTACTTTTggcaaatgtagtgcactatatagggaatagggtgatgtTTGGGAGACAGGTACCCATCTCCACCATCCTCCTAAAAAGGTTAATCATGCCTGGTTGCAATGGTTCAGAGATCTGTTTGTTCACAGCTCACAGTAGCCAAACCAGTGCCTGATggtgtgatgggggggggggggaattatgAAAGAGCACAGCAATGTTGTGATGTTTTTTACATCCAGGTTAATTCCCGATGCTAGTCCCTCCCTAAACCCTGCCCCTGGCCACACCCATTACGTGCCGAAGCCCAACCCCCCTGGTCTAGCTCTTCTGAGGAGCCGCGGAGCAGTTGTCTTTCTAAAACCCTCCTGTTGGTTTTTTCTTTCTCAAACTTTCCAGCtaagttatttttgtattttttgggggggagaacTGTACTTTTATTAAATGTGAGGTGGCACCATCTCGGTTCAACTAAGAGTTCATTCCTATGTACATTTGATAAGGTAATAATGGAGTTTAAGAAGAGGTTTTAACAAGTTTAAAAAGTTGCAGTGATTACTAGTATATCAGAATGTTATAAATTATTACTACACATTTTCCTTTGCACCCTGTTGTGAATGAGTGCGAATGAGAGCTATTAAAGAAGTGGTTTGGGGGGGCACTACCGAGGCAAGGTGTggggtgtgtctgaaatggcaccggATTCCATTTTGTactgcactacctttgaccagggcccataagcaAGACTAAAATGGAGAAGACAGCGATGTCATCATTTTCAAGATTCTTCAGCAGGTCCACTGGGAGCCAAATGGAGCGCCCGGTGAACTTACCTGAATGACGCAGTTGGAGCGCTTAGCATGTTCTTTGTTATGACATTGTCTCAGTCTTCTCTTTTAGTCTTCCTGCCCATAGGGACTGGTCAaaatgtagtgtactatataggaaatagggtaccattaGGGACGTAGGCATGGAGATTATGATCGCTGCCCCCACACACCATGGTCAGAGGTCGGGCAGGGCAATTACAGCCAGGTCAAATGTGAAATGTACGTATTGTAATAAACATGCTAAACTCAAGCGAGCACTGGTTATTTTATTGGAGTTTTCTGTTAGGTTTTACATttgtattattactattataacgCTAGTGCCTTGTTGAAAGTCTTAAGTCACACAGCCTCTGACATGGAAATAAATGTACCAAGTTTGTTTTCGGTTTGATCAGTAACAAAGATATTCAATAAGCATGCCATGCATCAATCTACATAGGGTTGTTTTGGCACTCCAACCCAGAATTGCATCTTTGTATATGTTGTGTTTGTTCCCCTGTTCACTCTGAGTCAGAGCGGGAACAGTGTTtctatcccaaatagcaccctattccctatgtagtgcactacttttgactgggttccataggactcttgtcaaaagtagtgcactatatagggtatctggtgccatttgggaaccaTATGTGTCCTCAGCTGTGACATGTTTTTCTCCACTGTTCTATTATTCTAGTGAGTCTGTGATTTGAGCTGCACCAACACATTCAGTAAATATGACCACATTGCTTTGTATATTGTTTTCCTCTGAGTATattgaataaaataaataaaatatgcctCTATAGGA
>TU1095837
accaccacctccacaccctccagctcctccacccgGCCAGCCTCCTGCTCCTTCACCCCAACCCTAGCGTCACACTTCAACGAGAATCTCATCAAGCATGTCCAGGGCTGGCCCGCCGACCACGCAGAGAAACAGGCGTCCAGGCTACGTGATGAGGCCCACACCATGGGAAGCATCAACATGTCTGAAAATTGCACCGAGCTCAAAAATCTGAGATCCTTAGTTCGAGTCAGTGAAATTCAAGCGACATTGCGCGAGCAGAGGATATTATTTTTGAGACAACAAATTAAAGAACTTGAAAAGTTGAAGAATCAGAATTCCTTCATGGTCTGAGGACTTGACttgaagagaggaaaggggggagagaccCATTGCACATGGTTGGAAGAGAGCTCTTGGTTGGGAGAACCATTGTGTTCTTGTTCTGTGCCCAGTCTTAACACTTTTGAGCTGCAGTTGGATTGGCTTTGGACCACTGGACTGGGCTTTGAGAGGGCTTGGTTAGGTGGAGAGAGTGAGTGGTTGATGGTTGTTGTGGAGGAGAAGAGCGGAGAgaagggttagacatggcttgcatcccaaatggcacccttttcaaTTTATACTGCGCTACTTTTGAACGGGGCCAACAGGACGCAATCATGGTTGGTTTTTGTGCCCTGGAGATGTAGATTTCTTGTAGATGTCATCCATGTTGTAAATATGTTTTGTAGATGACTGAAGCCATGGAAAGCCATGTTTATCAAAGCTTTTGACATCCAAACGAGTCAACGTTATGCCCGAGGAATCAACAGCTTCAGTTCATAGCCTTCTTCATGTTAAACGCATCAGTTgggatatgtcccaaatggcaccctattccttatatagtgcacactattccctatatagtacactacttttgaccggaaccctatgggccatggtcgatagtagtgcactaaatagggaatagggtgccatttgggacaaaggcaCTCAGTCTGCAGACTTCAAGCTTTTTTGTTAATAGATCAGTGAACCATTGCCTTGAGCATGTCTGTGACCTATGACCTGCATGGAACTGGAAGTTAGCGTTATAATAACtgaaacataaaaaaataccGTAACGCAAACAAAACAAACTCACGTTTTAATTTTCTAGTTTTCTCTGCTCttgcataataataataataatgctctATGGATGAAACCCAGTCATATTTGACGAATGTATTACCCTCTGGTGGAAGTATTAaggttacacaaacacacacgatgtctctcaaatggcacccttttccctttatatGCCAGTACTTTTggcaaatgtagtgcactatatagggaatagggtgatgtTTGGGAGACAGGTACCCATCTCCACCATCCTCCTAAAAAGGTTAATCATGCCTGGTTGCAATGGTTCAGAGATCTGTTTGTTCACAGCTCACAGTAGCCAAACCAGTGCCTGATggtgtgatgggggggggggggaattatgAAAGAGCACAGCAATGTTGTGATGTTTTTTACATCCAGGTTAATTCCCGATGCTAGTCCCTCCCTAAACCCTGCCCCTGGCCACACCCATTACGTGCCGAAGCCCAACCCCCCTGGTCTAGCTCTTCTGAGGAGCCGCGGAGCAGTTGTCTTTCTAAAACCCTCCTGTTGGTTTTTTCTTTCTCAAACTTTCCAGCtaagttatttttgtattttttgggggggagaacTGTACTTTTATTAAATGTGAGGTGGCACCATCTCGGTTCAACTAAGAGTTCATTCCTATGTACATTTGATAAGGTAATAATGGAGTTTAAGAAGAGGTTTTAACAAGTTTAAAAAGTTGCAGTGATTACTAGTATATCAGAATGTTATAAATTATTACTACACATTTTCCTTTGCACCCTGTTGTGAATGAGTGCGAATGAGAGCTATTAAAGAAGTGGTTTGGGGGGGCACTACCGAGGCAAGGTGTggggtgtgtctgaaatggcaccggATTCCATTTTGTactgcactacctttgaccagggcccataagcaAGACTAAAATGGAGAAGACAGCGATGTCATCATTTTCAAGATTCTTCAGCAGGTCCACTGGGAGCCAAATGGAGCGCCCGGTGAACTTACCTGAATGACGCAGTTGGAGCGCTTAGCATGTTCTTTGTTATGACATTGTCTCAGTCTTCTCTTTTAGTCTTCCTGCCCATAGGGACTGGTCAaaatgtagtgtactatataggaaatagggtaccattaGGGACGTAGGCATGGAGATTATGATCGCTGCCCCCACACACCATGGTCAGAGGTCGGGCAGGGCAATTACAGCCAGGTCAAATGTGAAATGTACGTATTGTAATAAACATGCTAAACTCAAGCGAGCACTGGTTATTTTATTGGAGTTTTCTGTTAGGTTTTACATttgtattattactattataacgCTAGTGCCTTGTTGAAAGTCTTAAGTCACACAGCCTCTGACATGGAAATAAATGTACCAAGTTTGTTTTCGGTTTGATCAGTAACAAAGATATTCAATAAGCATGCCATGCATCAATCTACATAGGGTTGTTTTGGCACTCCAACCCAGAATTGCATCTTTGTATATGTTGTGTTTGTTCCCCTGTTCACTCTGAGTCAGAGCGGGAACAGTGTTtctatcccaaatagcaccctattccctatgtagtgcactacttttgactgggttccataggactcttgtcaaaagtagtgcactatatagggtatctggtgccatttgggaaccaTATGTGTCCTCAGCTGTGACATGTTTTTCTCCACTGTTCTATTATTCTAGTGAGTCTGTGATTTGAGCTGCACCAACACATTCAGTAAATATGACCACATTGCTTTGTATATTGTTTTCCTCTGAGTATattgaataaaataaataaaatatgcc

Function

NR:

description
WW domain-containing adapter protein with coiled-coil-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935253.1 False 4518 mRNA 0.48 13 27357766 27401629
TU1095837 True 2920 lncRNA 0.43 3 27398347 27401620

Neighbor

gene id symbol gene type direction distance location
rab18a LOC106578546 coding upstream 533944 26812026 ~ 26823822 (+)
LOC110535543 LOC106590025 coding upstream 547802 26760317 ~ 26809964 (+)
LOC118936350 NA coding upstream 606208 26713595 ~ 26751558 (+)
LOC110536591 LOC106578544 coding upstream 657490 26618148 ~ 26700276 (+)
LOC110535542 LOC106578541 coding upstream 956831 25858845 ~ 26401631 (+)
bambia LOC106578551 coding downstream 7924 27409002 ~ 27412913 (+)
LOC110536609 NA coding downstream 191497 27593126 ~ 27597600 (+)
mtpap LOC106578552 coding downstream 337752 27739381 ~ 27765414 (+)
jcada LOC106578555 coding downstream 408420 27810049 ~ 27845341 (+)
svila LOC106578556 coding downstream 465397 27867026 ~ 28011031 (+)
G961345 NA non-coding upstream 46 27357510 ~ 27357720 (+)
G960911 NA non-coding upstream 173726 27179188 ~ 27184040 (+)
G960912 NA non-coding upstream 173871 27183240 ~ 27183895 (+)
G960910 NA non-coding upstream 176944 27177389 ~ 27180822 (+)
G960892 NA non-coding upstream 207806 27149647 ~ 27149960 (+)
G961357 NA non-coding downstream 4366 27405995 ~ 27406206 (+)
G961364 NA non-coding downstream 19289 27420918 ~ 27421124 (+)
G961502 NA non-coding downstream 230537 27632166 ~ 27632484 (+)
G961514 NA non-coding downstream 248587 27650216 ~ 27650418 (+)
G961739 NA non-coding downstream 283661 27685290 ~ 27685530 (+)
G960816 armc4 other upstream 428739 26928676 ~ 26929027 (+)
G960696 LOC106583976 other upstream 560472 26713625 ~ 26797294 (+)
G958300 idi1 other upstream 2562030 24794600 ~ 24795736 (+)
G957942 NA other upstream 2756113 24600471 ~ 24601653 (+)
G956797 NA other upstream 3580921 23775772 ~ 23776845 (+)
G961864 NA other downstream 427117 27828746 ~ 27829177 (+)
G961984 NA other downstream 495537 27897166 ~ 27941575 (+)
LOC110535556 LOC106578558 other downstream 730992 28132122 ~ 28249912 (+)

Expression


Co-expression Network