LOC110536595 (LOC106578630)


Basic Information

Item Value
gene id LOC110536595
gene name LOC106578630
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 32722273 ~ 32749027 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935310.1
CGTGACTCTTCCTCCAACTGCATCTCTACCTGAGCTTTTGAAGAACAGCGAAAACTGTTGATCCCTGCTTTCAACATGTCTTCCTCTGCACACTGTACCGGGTCCAACTTCCCTGGGCGCCTGGAAAGCCCCATCTGTAGCTCCAATGCTGAGCAAGATGACCACCGTCTTCCCAAGTTTGAGGACTTTGGGGAGGCTGTGGCAATTCCCCATGGCCCCTCCAGTGATGCCACCCTGGAATGTGTGAGAGTGGACATGATGCAATATGAGAACAAGAGCAACCACCACTGTCACTTGTACGAAGGCAAAAACAACATTCTCATCGTCCGCAGAGCCCAAGAGTTTCAGATGACCCTCCAGTTCAACCAGCCCGTAAATCCCAGTGACAAATTCCAGATTGAGTTTTACATTGGTATCAATACCTACGTGTTGAATGGCACAAAGATCATCATCTCCTTTGACGGCTCACAAACTGGGAATTGGACCGGCCGCATGATACAGCAACAAGGGGAGGAGTGCGTGGTGGGCATCACCCCTTCTGCAGACGCCATCATCGGGAAGTACTACACGAGTGTGGCGGTCATCGGGTCCAATGGAATCTCAAGGACACAAAAGGACTCTGGAACAGACTTCTACCTCCTGTTCAACGCCTGGGCGTCCAATGATGAAGTGTACATGCCCAATGAGGAAGAAAGGCAGGAGTATGTGATGAATGAAAATGGCTACATATACCAGGAGGAATCAGGTGATGGAAGACAATGGTATTATGGTCAGTTTGTGGAAGGGATTCTTGATGCCTGTATCAAAATCTTGGATGACTCACACATGCCTCTAGTAAACAGAGGCGATGCTGTCAAAGTCTGCAGGATAGGCTCTGCAATGATGAACTCCCAGGATGACCGCGGGGTCTTGGTGGGCAACTGGAGCGATGACTACTCCCTTGGCACTGCACCAACCTTCTGGATTGGCAGTGACCAGATCCTGCTCCAGTACGTCAACAAAGGGCCCGTCAGCTTCGCCCAGTGCTGGGTCTACGCCGGGACGTTCAACACCTTTCTGCGGTGTCTGGGCATCCCTGCCAGGGTGATCACCAACTTCAACTCTGCCCACGACAACACAGGGAACATAATCACAGATCTCGTCTTCAACTCAGTGGGAAATGTACTTGAACTGAACGAGCGCCTTACCAGAGACTCAATCTGGAACTACCACTGCTGGAATGAGGCTTACTTGTCCAGACTTGACCTCCCTGCAGGCCAGAACTTTGGTGGCTGGCAGGTGGTGGATTCAACCCCCCAGGAAACCAGTGATGGATATTTCCGCTGTGGACCTTGCTCTGTCAAAGCCATCAAGGAAGGAATGCTTGGCTATCAATTTGATGCCCCGTTTGTGTTTGCTGAGGTGAATAGCGACGTTTACAAATACAAGCTAAACTCACAAACTGGGAAAACTGAGTTACTAAGCGTAGACACAACTTATGTCGGCATGAAAATCCTGACAAAGTCCATTGGTGGAAACAATTATGCGCCAATGGACATTACAGGGACGTACAAATACCCAGAAGgtagtAGTAAAGATGAGGAGACCATGAGGAATGCCGAGAGAACCTACAAGACGCATTTGCAATATGACGATGAGCAGGGCGTGGCGATGACGCTGGAGATCCCGCAGGAGCGTGTGAAGATTGGCCAGAACTTCCAGATGGCTGTGGTCTTCAGGAACCTGAGTGAAGACACACGCACCATCCATGGCTTCCTGGTCGGCTCCACGATCTACTACACCAACATCCAAAGGGCTCAGTTCAAGCAGGAGACCTTTGACGTCACTCTGAAACCCATGGAGACGTCGAGGATACAGGTGGTCGTGCTGGCCCAGAATTACATGCCCAAGCTGGGTTGCCAATCCAGCCTCCGCTTTGTGGTGACGGCCAAGAGCATGGAGAACAACCAGGACTTGATGGCCATACAGATAGTGAACCTGAAAGGCCCCGAGTTGGCCTTTGCGATGAGTGGACCAGCGAAGGTGAACCAGGAGGTATTTGTCAAGGTGGAGTTCACCAACCCGTTCCCATTCAGCCTGCATGACGTGAAGATGGCCATGCAAGGGCCTAATTTCATCTCGTACCGGGAAAAGTTGTACAGtgagATCGCTACCGGCACCTCCATCACCTGGATGGAGTCCTCTGTCCCTACGAGGTCTGGGAATACAATGATCTATGCTGTCCTGGACTGCTCGGTCCTTGGAAATGTGCAAGGCAATTGGGCCATCGGCATCCAGGCCTGATAATCGCACAGGAAGCCCTTCCCACCTGCTAATCGCCTGCCATCGACCGGAGAACCATGGACGAATAGAGGCTCTTGTATAGATCTGAAAGGATTTGATTACTGGATAAGCAATTCCATCTAGCCTATGAGAAGGTGAGGGCGAGCAAATAACATACCCCTTACGGAAAAAACACATGATTCACAGGTGAAATTTCCTCCTGGGAAATCATGTGCAACCATGTTTTTTTGGAACACTGAAGTTTACATGTGGATTTTACATGTGATCACATAACCTTTCACGTGAATATTTTTCAAATGAGATTCCACAGATGATGCCCTGCAAACAAAATTAAGTCGTTAGGATACACACAAACAGTTATTTTAGTGTTTTCAATGTACATTTTTGACATACATAATTACattgtgtatgtttatttatacagtaattattattcaacacgTCCTCAGCTGGGTTTTGAACTCACAAACTCTTGGTTCAGAGCATCCCGACCTTCCTGCTACACCATCACGTCGGTGTCAATTACAGATTGAACCTGTATTCGTACACTTTGGGTTTAAGTAAAGTAAATATCAGCTTTGTTAAAAATACACTATTATAAAAAACGATTATAgttatcatagtgattcaggagtaacattaaaacagaataatatCCCCCACAAACAGTAGACAACTATTCAGAAAACTATACTTATTCTGAAATAACTATGAAATCTATGGTGAGAGAATAATAAGATGAACTAAAATAGAAGTGCAGATGGCACTCTTTTGCTAAGTGCAGACATGTATTATAGATAATGAATGTGTATAGGAATGCTATAGACTTTGATGGGCAGCAGAAAGATCAGCGTAACCCAGAAGTTGTCAATTCTAATCCCAGGTGGGGTCATATTGAAAAGTCACTACTAAGTGATCATGTCAAATGTAATCATGTTGTCattgattaaatattttgtaCACTATTTTAGCTGAATAGTGTACCATTTACTTTAAAACCCACATATCATTTGATCCCCTTACACAAAAATACATGCAaaatcacattttcacatgtgaagtaCCTGAAAttttcacataaaaaaaaaagacgAGGTCAGTTCTTCACATATGAAACCACATGTTCACATGTATTCACTTTAAagttcacatgttaacaccaccttttcacatatgaggagaataacatgttttcacctcacgTGGAATTTGTTTTTCACGTGTGAAAACGTTCACATAGGAACATCTAACTCTCAAATGTGTAGTTTCATGGTATCGTACGTAGATATTTTGCATCCTcatgttgtcacatttatttcacgAGATCATGTTTTCGcatgtgtagtttcatgttatcagatgttgcttttacatgttgtcacagATGTTATCACATGTGAAATGTATGTGATTTTTCTGTAAGGGATTGCTTACACCGATAAGATTTGTTACAGAAAGGGCTAGGGGCTAGGAGTTGATTTGGAATTGGGCAGAAGAGGGAG

Function

NR:

description
PREDICTED: coagulation factor XIII A chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935310.1 True 3785 mRNA 0.45 15 32722273 32749027

Neighbor

gene id symbol gene type direction distance location
LOC110535582 LOC106578581 coding downstream 19688 32695362 ~ 32702585 (-)
LOC110535581 LOC106578582 coding downstream 172630 32489195 ~ 32549643 (-)
LOC110536613 NA coding downstream 286822 32434028 ~ 32435451 (-)
LOC110535574 peci coding downstream 407398 32298402 ~ 32314875 (-)
LOC110535572 LOC106578588 coding downstream 463866 32245466 ~ 32258407 (-)
LOC110536597 LOC106578630 coding upstream 18738 32767765 ~ 32796075 (-)
LOC110535590 LOC106578614 coding upstream 505347 33254374 ~ 33320337 (-)
LOC110535591 LOC106578613 coding upstream 586477 33335504 ~ 33376086 (-)
LOC110535005 nom1 coding upstream 652269 33401296 ~ 33412561 (-)
LOC110535593 LOC106578609 coding upstream 840466 33589493 ~ 33636781 (-)
G968897 NA non-coding downstream 4672 32717386 ~ 32717601 (-)
G968894 NA non-coding downstream 8233 32713723 ~ 32714040 (-)
G968875 NA non-coding downstream 38752 32683286 ~ 32683521 (-)
G968844 NA non-coding downstream 55896 32636493 ~ 32666377 (-)
G968751 NA non-coding downstream 233941 32486998 ~ 32488332 (-)
G968901 NA non-coding upstream 89723 32838750 ~ 32879586 (-)
G969224 NA non-coding upstream 471574 33220601 ~ 33222033 (-)
G969230 NA non-coding upstream 483314 33232341 ~ 33261228 (-)
G969250 NA non-coding upstream 579373 33328400 ~ 33328646 (-)
G969306 NA non-coding upstream 676826 33425853 ~ 33473866 (-)
G968868 NA other downstream 54783 32666752 ~ 32667490 (-)
G967535 NA other downstream 669080 32050960 ~ 32053193 (-)
G966663 LOC100194703 other downstream 1330929 31391036 ~ 31391344 (-)
G962982 NA other downstream 3999970 28721646 ~ 28722303 (-)
G970066 NA other upstream 1125787 33874814 ~ 33875272 (-)
LOC110535616 LOC106578707 other upstream 2061266 34810223 ~ 34978953 (-)
G971137 NA other upstream 2087945 34836972 ~ 34838926 (-)
G972383 LOC106578698 other upstream 3123642 35872669 ~ 35873258 (-)
G974622 LOC106578671 other upstream 4464857 37213884 ~ 37214896 (-)

Expression


Co-expression Network