LOC110535597 (LOC106578605)


Basic Information

Item Value
gene id LOC110535597
gene name LOC106578605
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 33695897 ~ 33704784 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021620686.2
CCCGACACAGCTGTGGCTGTTTTCCTGCAGAGGAAGCCTGTCTCTGGTATGAGGTCTGCGCTCAGGAATGAAATAGCAGCtttttttctgcctctctctccctctcccccaaaaCGATGATGTGACCTAACTACGTGATAACTGTCTGAGCAGTAAGAGAGCAGCACAACTCACAGCTTCATCATTGTCGAGGTGCGAATGAACATAGTCGGTTGTCGCTAGATCATACACTTAGAACGTCTGGACATCCAAGCACTCTAAGTGCCAAATGCCAAGACTAGAAGAACACTGTTGGAGTCGCTCCTGTGCATCTAGGGTGGAATCTAAGACTTTTTCTGGGGGAAACTGGGTCGCATCGAGAGCTGAAGAAATGATGTCCATTGTCACAACAGTGCTCAGCAATGCATATGGCTCGCTGCATAGTGTGCGAGCAGCACACTTGATCAGGCGGGGTCTCGTCCTTTTCACCGTGGGAGTAGTTCTTGCGTTGGTGCTCAACTTGCTGCAGTTACAAAGAAATGTGACTTTGTTTCCCGAAGAGGTGATGGCAACTTTGTTTTCATCAGCGTGGTGGATACCCCCTTGCTGCGGCACGGCAGCTGCTGTTGTTGGCCTGCTATACCCCTGCATCGACAGCCATCTAGGAGAGCCCCACAAGTTCAAGAGGGAATGGGCTAGTGTCATGAGATGCATTGCAGTGTTCGTTGGCATCAACCATGCCAGTGCTAAACTACACTTTGCCAATAATGCCCAGCTGTCCCTGACCCTGGCTGCCCTGTCCCTGGGACTGTGGTGGATGTTTGATCGCTCGAGGAGTGGCTTCGGCCTGGGCATCGGGACGGCATTCCTTGCCACCGTTATCACACAGCTGCTGGTCTACAACGGTGTCTATCAATACACGTATCCAGACTTTCTGTATGTGCGCTCTTGGCTTCCATGCATATTCTTCTCAGGAGGAGTGACTGTGGGGAACATAGGACGCCAGCTAGCCATGggTGGTGTCGAGAAACTCCACAACGACTGAAAAGAGGGGAAAGAAGGAAGACTGACAATATGGAGAACAGGCGTAACGGAACCAAGTCTGCCGTCATGGGGAGAGACAGTTTGAAAGAAAATAtacttattatttttttactacTTTTCTGTGTGTTATAACAAAGAGCTAGCCAGAACACCCTTGACTTAACGTGCCATGACTTCTGCACCTCTTGGTGGCCAAAATAACTTAAAGTATTAGGCTAGCAGTTGCCGCTATGCTATCTCTATTAGGATCCATATAGCATTATTCCAGAAGATAGTCGCAAAGCTATCCCTGTTAGGGTTCATATAGCATTAGGCTAGCAGTTAGACACTAGGCTATACCTGTTTGATTCCAAATAACATTGTGCTAGCAGTTAGCTGCTAGGCTATACCTATTTGGGTCCATATAGCATTAGCCTAGCAGTTAGCCGCTAGGCTATACCTATTTGGGTCCATATAGCATTAGGCTATATGGCCTAATGAAATAGGCTATATGGCCACTAGCTCCTCCCTCACTATGGCAGGACAGTATTTGCCCTTCCAATTCTTCGAAATGAAAAGTTAACTTGTTTCAGTTTTACAGTGTAAGAGGGAACTATTAGCTttttgcaggtgtgtgtgtgcgcgtgtggatTTGTGCAGGTCTGTTATGGCTGAGTACAAAATGACCGTAAAAGGGAAACATTTAAGAGCTGTGCAAAAATGTCTGACACTCACAGAGACAGCGACCAACAGTATGTCACCGATGACATGTATTGTGTTCCCAATATTGTAATTAACCAAGAAAAATATATATCAGAGAAATTAGAATGCTAACACCTATAACCCCAAACCAAATATACATGAGATCACAGATGATGTGACCATGTTTTGAAAGATTGTACCATGATACTACACTAAGTAAGCATATTCATGGTTTCAGTGAAATCAGTAATGTTAACAAAAAGGCACCTGAATGTAATCGGGTGTGAAAACTCACCTCTTGGCTGACTTTGTGGATATGGTGTGCAACCTGGAGGTGACCTATGACCCCTCAAATGAATGGCTGATTTCCAATTTAGAATTTTCCAGACTTGGCATTAAAGTTTATGATCATACATTAAGAGAAggagacaggacatttttactatgGCCTGCGGATTTGCAATCTGTGATTGCCTTTGTATTATAGAATTGAGTGCTTTTGTCACTACTATACCAGTTCAATTTTATTGTACATAATTATATATTGCTTACATGTATAGTCACTTCCCTATATAATCAGACAGGTATTACCACCAATTCAGTTCAATAGTTGGGGGGCTAAAGGAATAAAAGTGCAATCACATATACCTGAGCTGACTATTCTTCTTATTTATTATTTCTGACAATAGTTAAGAGGTGAGACTCCATGGAATCATATGCAGTGTGGATATAAAAAAGGAGCATCAAATAAGCAATAACAGCAGCTTTTGTAAAAACAAAAATAGTCTAAGATTACTTGCATTCTTCGACTGTATACCAATGACTATTCTCTCCatgaggagaagaaaaaaaaaacattgtgtcaaaCTGTTTGTAAATTCTCCTAGTAGTTAAAACATTATTAAATGGGAATACagattatattttttttatattttgttaTGTATAGATCACAGCGGGATTGGTTGGTACGCCTGGTTCGGTGTGAATCTTTGCTCAATTTCAggtgtttgtcccaaatggcaccctattctctatatagtggactacttttgaccaggggccctggtcaaaagtagtgcactatatagggaatagggttccattttggaTGCAATCCAGGTGTGCTGCTGGGAGAAAAGGAAGCTTTATTATTGGGGTGTTTAAAACACCTATTATTTCAATGTgtagagagtgtgagtgtgttttcAGCTGTGTATCATTTTTATTACCTTGAATCCAAGTGGAAAATAAAAAGGAACTCCTAATGA

Function

NR:

description
insulin-induced gene 1 protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021620686.2 True 2975 mRNA 0.43 6 33695897 33704784

Neighbor

gene id symbol gene type direction distance location
LOC110535594 LOC106578606 coding downstream 21712 33669433 ~ 33683429 (-)
LOC110535593 LOC106578609 coding downstream 59116 33589493 ~ 33636781 (-)
LOC110535005 nom1 coding downstream 283336 33401296 ~ 33412561 (-)
LOC110535591 LOC106578613 coding downstream 319811 33335504 ~ 33376086 (-)
LOC110535590 LOC106578614 coding downstream 375560 33254374 ~ 33320337 (-)
trnar-ccg NA coding upstream 29868 33734652 ~ 33734724 (-)
LOC110535598 LOC106578632 coding upstream 82591 33787375 ~ 33795186 (-)
LOC110535599 LOC106578604 coding upstream 143268 33848052 ~ 33859623 (-)
LOC110535600 LOC106578631 coding upstream 155051 33859835 ~ 33863490 (-)
LOC110535602 LOC106578636 coding upstream 458959 34163743 ~ 34171085 (-)
G969672 NA non-coding downstream 5499 33678425 ~ 33690398 (-)
G969627 NA non-coding downstream 91643 33603960 ~ 33604254 (-)
G969626 NA non-coding downstream 94345 33601343 ~ 33601552 (-)
G969624 NA non-coding downstream 95222 33600475 ~ 33600675 (-)
G969707 NA non-coding upstream 21069 33725853 ~ 33726288 (-)
G969767 NA non-coding upstream 78761 33783545 ~ 33783829 (-)
G969772 NA non-coding upstream 88658 33793442 ~ 33793900 (-)
G969777 NA non-coding upstream 96000 33800784 ~ 33801231 (-)
G969812 NA non-coding upstream 128241 33833025 ~ 33833231 (-)
G968868 NA other downstream 1028407 32666752 ~ 32667490 (-)
LOC110535581 LOC106578582 other downstream 1146311 32489195 ~ 32549643 (-)
G967535 NA other downstream 1642704 32050960 ~ 32053193 (-)
G966663 LOC100194703 other downstream 2304553 31391036 ~ 31391344 (-)
G962982 NA other downstream 4973594 28721646 ~ 28722303 (-)
G970066 NA other upstream 170030 33874814 ~ 33875272 (-)
LOC110535616 LOC106578707 other upstream 1105509 34810223 ~ 34978953 (-)
G971137 NA other upstream 1132188 34836972 ~ 34838926 (-)
G972383 LOC106578698 other upstream 2167885 35872669 ~ 35873258 (-)
G974622 LOC106578671 other upstream 3509100 37213884 ~ 37214896 (-)

Expression


Co-expression Network