trnar-ccg-3


Basic Information

Item Value
gene id trnar-ccg-3
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 34731057 ~ 34731129 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnar-ccg-3
GatccagtggcctaatggataaggcatcaGCCTCCAGAGCTggggattgtgggttcaagtcccacctGGGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccg-3 True 73 mRNA 0.56 1 34731057 34731129

Neighbor

gene id symbol gene type direction distance location
trnar-ccg-2 NA coding upstream 1389 34729596 ~ 34729668 (+)
LOC110535611 LOC106578646 coding upstream 18447 34559341 ~ 34713016 (+)
acad11 acad11 coding upstream 215720 34449722 ~ 34515337 (+)
LOC110535606 LOC106578642 coding upstream 300258 34428058 ~ 34430799 (+)
LOC110535604 LOC106578639 coding upstream 303500 34183839 ~ 34427557 (+)
trnar-ccg-4 NA coding downstream 1395 34732524 ~ 34732596 (+)
trnar-ccg-5 NA coding downstream 2862 34733991 ~ 34734063 (+)
trnar-ccg-6 NA coding downstream 4347 34735476 ~ 34735548 (+)
trnar-ccg-7 NA coding downstream 5825 34736954 ~ 34737026 (+)
trnar-ccg-8 NA coding downstream 7303 34738432 ~ 34738504 (+)
G970942 NA non-coding upstream 5176 34725630 ~ 34725881 (+)
G970936 NA non-coding upstream 11863 34718936 ~ 34719194 (+)
G970934 NA non-coding upstream 14357 34716356 ~ 34716700 (+)
G970557 NA non-coding upstream 111798 34618995 ~ 34619259 (+)
G970951 NA non-coding downstream 22160 34753289 ~ 34764082 (+)
G970969 NA non-coding downstream 42028 34773157 ~ 34773366 (+)
G971016 NA non-coding downstream 114108 34845237 ~ 34845761 (+)
G971261 NA non-coding downstream 280702 35011831 ~ 35016554 (+)
G971385 NA non-coding downstream 469935 35201064 ~ 35201384 (+)
G970489 LOC106578645 other upstream 208717 34516457 ~ 34522340 (+)
G970283 NA other upstream 551009 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 560070 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 935996 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1126247 33604513 ~ 33604810 (+)
G972725 NA other downstream 1518844 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2810967 37542062 ~ 37543202 (+)
G973918 NA other downstream 2920009 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 3100392 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 3289320 37866715 ~ 38045713 (+)

Expression


Co-expression Network