trnar-ccg-5


Basic Information

Item Value
gene id trnar-ccg-5
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 34733991 ~ 34734063 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnar-ccg-5
GatccagtggcctaatggataaggcatcaGCCTCCGGAGCTggggattgtgggttcaagtcccacctGGGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccg-5 True 73 mRNA 0.58 1 34733991 34734063

Neighbor

gene id symbol gene type direction distance location
trnar-ccg-4 NA coding upstream 1395 34732524 ~ 34732596 (+)
trnar-ccg-3 NA coding upstream 2862 34731057 ~ 34731129 (+)
trnar-ccg-2 NA coding upstream 4323 34729596 ~ 34729668 (+)
LOC110535611 LOC106578646 coding upstream 21381 34559341 ~ 34713016 (+)
acad11 acad11 coding upstream 218654 34449722 ~ 34515337 (+)
trnar-ccg-6 NA coding downstream 1413 34735476 ~ 34735548 (+)
trnar-ccg-7 NA coding downstream 2891 34736954 ~ 34737026 (+)
trnar-ccg-8 NA coding downstream 4369 34738432 ~ 34738504 (+)
trnar-ccg-9 NA coding downstream 5836 34739899 ~ 34739971 (+)
trnar-ccg-10 NA coding downstream 7321 34741384 ~ 34741456 (+)
G970942 NA non-coding upstream 8110 34725630 ~ 34725881 (+)
G970936 NA non-coding upstream 14797 34718936 ~ 34719194 (+)
G970934 NA non-coding upstream 17291 34716356 ~ 34716700 (+)
G970557 NA non-coding upstream 114732 34618995 ~ 34619259 (+)
G970951 NA non-coding downstream 19226 34753289 ~ 34764082 (+)
G970969 NA non-coding downstream 39094 34773157 ~ 34773366 (+)
G971016 NA non-coding downstream 111174 34845237 ~ 34845761 (+)
G971261 NA non-coding downstream 277768 35011831 ~ 35016554 (+)
G971385 NA non-coding downstream 467001 35201064 ~ 35201384 (+)
G970489 LOC106578645 other upstream 211651 34516457 ~ 34522340 (+)
G970283 NA other upstream 553943 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 563004 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 938930 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1129181 33604513 ~ 33604810 (+)
G972725 NA other downstream 1515910 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2808033 37542062 ~ 37543202 (+)
G973918 NA other downstream 2917075 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 3097458 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 3286386 37866715 ~ 38045713 (+)

Expression


Co-expression Network