trnar-ccg-11


Basic Information

Item Value
gene id trnar-ccg-11
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 34742862 ~ 34742934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnar-ccg-11
GatccagtggcctaatggataaggcatcaGCCTCCGGAGCTggggattgtgggttcaagtcccacctGGGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccg-11 True 73 mRNA 0.58 1 34742862 34742934

Neighbor

gene id symbol gene type direction distance location
trnar-ccg-10 NA coding upstream 1406 34741384 ~ 34741456 (+)
trnar-ccg-9 NA coding upstream 2891 34739899 ~ 34739971 (+)
trnar-ccg-8 NA coding upstream 4358 34738432 ~ 34738504 (+)
trnar-ccg-7 NA coding upstream 5836 34736954 ~ 34737026 (+)
trnar-ccg-6 NA coding upstream 7314 34735476 ~ 34735548 (+)
trnar-ccg-12 NA coding downstream 1406 34744340 ~ 34744412 (+)
trnar-ccg-13 NA coding downstream 2880 34745814 ~ 34745886 (+)
trnaw-cca-5 NA coding downstream 4362 34747296 ~ 34747369 (+)
trnar-ccg-14 NA coding downstream 7325 34750259 ~ 34750331 (+)
trnar-ccg-15 NA coding downstream 8803 34751737 ~ 34751809 (+)
G970942 NA non-coding upstream 16981 34725630 ~ 34725881 (+)
G970936 NA non-coding upstream 23668 34718936 ~ 34719194 (+)
G970934 NA non-coding upstream 26162 34716356 ~ 34716700 (+)
LOC110535611 LOC106578646 non-coding upstream 29846 34559341 ~ 34713016 (+)
G970557 NA non-coding upstream 123603 34618995 ~ 34619259 (+)
G970951 NA non-coding downstream 10355 34753289 ~ 34764082 (+)
G970969 NA non-coding downstream 30223 34773157 ~ 34773366 (+)
G971016 NA non-coding downstream 102303 34845237 ~ 34845761 (+)
G971261 NA non-coding downstream 268897 35011831 ~ 35016554 (+)
G971385 NA non-coding downstream 458130 35201064 ~ 35201384 (+)
G970489 LOC106578645 other upstream 220522 34516457 ~ 34522340 (+)
G970283 NA other upstream 562814 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 571875 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 947801 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1138052 33604513 ~ 33604810 (+)
G972725 NA other downstream 1507039 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2799162 37542062 ~ 37543202 (+)
G973918 NA other downstream 2908204 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 3088587 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 3277515 37866715 ~ 38045713 (+)

Expression


Co-expression Network