trnar-ccg-17


Basic Information

Item Value
gene id trnar-ccg-17
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 34754644 ~ 34754716 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnar-ccg-17
GatccagtggcctaatggataaggcatcaGCCTCCGGAGCTggggattgtgggttcaagtcccacctGGGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccg-17 True 73 mRNA 0.58 1 34754644 34754716

Neighbor

gene id symbol gene type direction distance location
trnar-ccg-16 NA coding upstream 1405 34753167 ~ 34753239 (+)
trnar-ccg-15 NA coding upstream 2835 34751737 ~ 34751809 (+)
trnar-ccg-14 NA coding upstream 4313 34750259 ~ 34750331 (+)
trnaw-cca-5 NA coding upstream 7275 34747296 ~ 34747369 (+)
trnar-ccg-13 NA coding upstream 8758 34745814 ~ 34745886 (+)
trnar-ccg-18 NA coding downstream 2855 34757571 ~ 34757643 (+)
trnar-ccg-19 NA coding downstream 4321 34759037 ~ 34759109 (+)
trnar-ccg-20 NA coding downstream 5806 34760522 ~ 34760594 (+)
trnar-ccg-21 NA coding downstream 7289 34762005 ~ 34762077 (+)
trnar-ccg-22 NA coding downstream 8772 34763488 ~ 34763560 (+)
G970942 NA non-coding upstream 28763 34725630 ~ 34725881 (+)
G970936 NA non-coding upstream 35450 34718936 ~ 34719194 (+)
G970934 NA non-coding upstream 37944 34716356 ~ 34716700 (+)
LOC110535611 LOC106578646 non-coding upstream 41628 34559341 ~ 34713016 (+)
G970557 NA non-coding upstream 135385 34618995 ~ 34619259 (+)
G970969 NA non-coding downstream 18441 34773157 ~ 34773366 (+)
G971016 NA non-coding downstream 90521 34845237 ~ 34845761 (+)
G971261 NA non-coding downstream 257115 35011831 ~ 35016554 (+)
G971385 NA non-coding downstream 446348 35201064 ~ 35201384 (+)
G971479 NA non-coding downstream 581403 35336119 ~ 35336343 (+)
G970489 LOC106578645 other upstream 232304 34516457 ~ 34522340 (+)
G970283 NA other upstream 574596 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 583657 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 959583 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1149834 33604513 ~ 33604810 (+)
G972725 NA other downstream 1495257 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2787380 37542062 ~ 37543202 (+)
G973918 NA other downstream 2896422 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 3076805 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 3265733 37866715 ~ 38045713 (+)

Expression


Co-expression Network