trnar-ccg-20


Basic Information

Item Value
gene id trnar-ccg-20
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 34760522 ~ 34760594 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnar-ccg-20
GATctagtggcctaatggataaggcatcaGCCTCCGGAGCTggggattgtgggttcaagtcccacctGGGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccg-20 True 73 mRNA 0.56 1 34760522 34760594

Neighbor

gene id symbol gene type direction distance location
trnar-ccg-19 NA coding upstream 1413 34759037 ~ 34759109 (+)
trnar-ccg-18 NA coding upstream 2879 34757571 ~ 34757643 (+)
trnar-ccg-17 NA coding upstream 5806 34754644 ~ 34754716 (+)
trnar-ccg-16 NA coding upstream 7283 34753167 ~ 34753239 (+)
trnar-ccg-15 NA coding upstream 8713 34751737 ~ 34751809 (+)
trnar-ccg-21 NA coding downstream 1411 34762005 ~ 34762077 (+)
trnar-ccg-22 NA coding downstream 2894 34763488 ~ 34763560 (+)
trnar-ccg-23 NA coding downstream 4365 34764959 ~ 34765031 (+)
trnar-ccg-24 NA coding downstream 5850 34766444 ~ 34766516 (+)
trnar-ccg-25 NA coding downstream 7327 34767921 ~ 34767993 (+)
G970942 NA non-coding upstream 34641 34725630 ~ 34725881 (+)
G970936 NA non-coding upstream 41328 34718936 ~ 34719194 (+)
G970934 NA non-coding upstream 43822 34716356 ~ 34716700 (+)
LOC110535611 LOC106578646 non-coding upstream 47506 34559341 ~ 34713016 (+)
G970557 NA non-coding upstream 141263 34618995 ~ 34619259 (+)
G970969 NA non-coding downstream 12563 34773157 ~ 34773366 (+)
G971016 NA non-coding downstream 84643 34845237 ~ 34845761 (+)
G971261 NA non-coding downstream 251237 35011831 ~ 35016554 (+)
G971385 NA non-coding downstream 440470 35201064 ~ 35201384 (+)
G971479 NA non-coding downstream 575525 35336119 ~ 35336343 (+)
G970489 LOC106578645 other upstream 238182 34516457 ~ 34522340 (+)
G970283 NA other upstream 580474 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 589535 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 965461 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1155712 33604513 ~ 33604810 (+)
G972725 NA other downstream 1489379 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2781502 37542062 ~ 37543202 (+)
G973918 NA other downstream 2890544 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 3070927 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 3259855 37866715 ~ 38045713 (+)

Expression


Co-expression Network