trnar-ccg-23


Basic Information

Item Value
gene id trnar-ccg-23
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 34764959 ~ 34765031 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnar-ccg-23
GatccagtggcctaatggataaggcatcTGCCTCCGGAGCTggggattgtgggttcaagtcccacctGGGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccg-23 True 73 mRNA 0.58 1 34764959 34765031

Neighbor

gene id symbol gene type direction distance location
trnar-ccg-22 NA coding upstream 1399 34763488 ~ 34763560 (+)
trnar-ccg-21 NA coding upstream 2882 34762005 ~ 34762077 (+)
trnar-ccg-20 NA coding upstream 4365 34760522 ~ 34760594 (+)
trnar-ccg-19 NA coding upstream 5850 34759037 ~ 34759109 (+)
trnar-ccg-18 NA coding upstream 7316 34757571 ~ 34757643 (+)
trnar-ccg-24 NA coding downstream 1413 34766444 ~ 34766516 (+)
trnar-ccg-25 NA coding downstream 2890 34767921 ~ 34767993 (+)
LOC110535615 LOC106578708 coding downstream 17838 34782869 ~ 34789746 (+)
LOC110535618 LOC106578705 coding downstream 662990 35428021 ~ 35442236 (+)
LOC110535619 NA coding downstream 749444 35514475 ~ 35521583 (+)
G970951 NA non-coding upstream 877 34753289 ~ 34764082 (+)
G970942 NA non-coding upstream 39078 34725630 ~ 34725881 (+)
G970936 NA non-coding upstream 45765 34718936 ~ 34719194 (+)
G970934 NA non-coding upstream 48259 34716356 ~ 34716700 (+)
LOC110535611 LOC106578646 non-coding upstream 51943 34559341 ~ 34713016 (+)
G970969 NA non-coding downstream 8126 34773157 ~ 34773366 (+)
G971016 NA non-coding downstream 80206 34845237 ~ 34845761 (+)
G971261 NA non-coding downstream 246800 35011831 ~ 35016554 (+)
G971385 NA non-coding downstream 436033 35201064 ~ 35201384 (+)
G971479 NA non-coding downstream 571088 35336119 ~ 35336343 (+)
G970489 LOC106578645 other upstream 242619 34516457 ~ 34522340 (+)
G970283 NA other upstream 584911 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 593972 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 969898 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1160149 33604513 ~ 33604810 (+)
G972725 NA other downstream 1484942 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2777065 37542062 ~ 37543202 (+)
G973918 NA other downstream 2886107 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 3066490 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 3255418 37866715 ~ 38045713 (+)

Expression


Co-expression Network