Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110535618 |
| gene name | LOC106578705 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 35428021 ~ 35442236 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1-like isoform X1 |
| id | description |
|---|---|
| K10703 | HACD, PHS1, PAS2; very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021620727.2 | True | 1311 | mRNA | 0.47 | 7 | 35428021 | 35442236 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535615 | LOC106578708 | coding | upstream | 638275 | 34782869 ~ 34789746 (+) |
| trnar-ccg-25 | NA | coding | upstream | 660028 | 34767921 ~ 34767993 (+) |
| trnar-ccg-24 | NA | coding | upstream | 661505 | 34766444 ~ 34766516 (+) |
| trnar-ccg-23 | NA | coding | upstream | 662990 | 34764959 ~ 34765031 (+) |
| trnar-ccg-22 | NA | coding | upstream | 664461 | 34763488 ~ 34763560 (+) |
| LOC110535619 | NA | coding | downstream | 72239 | 35514475 ~ 35521583 (+) |
| adcyap1 | LOC100135955 | coding | downstream | 152986 | 35595222 ~ 35601608 (+) |
| LOC110535011 | NA | coding | downstream | 277853 | 35720089 ~ 35866083 (+) |
| LOC110535623 | LOC106578698 | coding | downstream | 426029 | 35868265 ~ 35893791 (+) |
| LOC110535625 | NA | coding | downstream | 501478 | 35943714 ~ 35950398 (+) |
| G971748 | NA | non-coding | upstream | 60367 | 35362390 ~ 35367654 (+) |
| G971746 | NA | non-coding | upstream | 67724 | 35360096 ~ 35360297 (+) |
| G971740 | NA | non-coding | upstream | 71164 | 35356504 ~ 35356857 (+) |
| G971482 | NA | non-coding | upstream | 88475 | 35339207 ~ 35339546 (+) |
| G971479 | NA | non-coding | upstream | 91678 | 35336119 ~ 35336343 (+) |
| G971872 | NA | non-coding | downstream | 143052 | 35585288 ~ 35585489 (+) |
| G972024 | NA | non-coding | downstream | 188964 | 35631200 ~ 35631579 (+) |
| G972025 | NA | non-coding | downstream | 191279 | 35633515 ~ 35633755 (+) |
| G972026 | NA | non-coding | downstream | 192679 | 35634915 ~ 35635551 (+) |
| G972039 | NA | non-coding | downstream | 214174 | 35656410 ~ 35656619 (+) |
| G970489 | LOC106578645 | other | upstream | 905681 | 34516457 ~ 34522340 (+) |
| G970283 | NA | other | upstream | 1247973 | 34179703 ~ 34180048 (+) |
| G970054 | LOC106578636 | other | upstream | 1257034 | 34163816 ~ 34170987 (+) |
| G969752 | LOC106578632 | other | upstream | 1632960 | 33794375 ~ 33795061 (+) |
| G969456 | LOC106578609 | other | upstream | 1823211 | 33604513 ~ 33604810 (+) |
| G972725 | NA | other | downstream | 807737 | 36249973 ~ 36250586 (+) |
| LOC110535658 | NA | other | downstream | 2099860 | 37542062 ~ 37543202 (+) |
| G973918 | NA | other | downstream | 2208902 | 37651138 ~ 37679368 (+) |
| lztfl1 | LOC106590188 | other | downstream | 2389285 | 37813177 ~ 37835340 (+) |
| LOC110535015 | LOC106578726 | other | downstream | 2578213 | 37866715 ~ 38045713 (+) |
