LOC110535625


Basic Information

Item Value
gene id LOC110535625
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 35943714 ~ 35950398 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002475284.2
GAAGCTGACAAGAGGTGatgctagggctgggcgatatggcgaTATATATCGTGTGACAATAGAAAAACGCATATGATTTCATATTATGCTGTATCGTTTATTTCGATGTGTCGCAAATCACTCTTTACGGCAATATTTTTCGTCAATTGGACGACACTTTGCGTGCCGTGTGGAAGGAAATGTGCAACACTAACAAACATGGAGGAGAGTGAATGTGACACAGAGCACGGAGACACGGAGCTCGTACCTAAAGGAGGGGTCACATGGACGTGGTTTGGGTATGAAAAGTCTGACACGGACCAGAAAACCGCCCTCTGCAAAATATGCCGCAGGCCGGTcctgacaacaggctcaaacaccagtAACCTATTTTACCACCTACGCAAGAATCACGTGAAACAGTACGGAGAGAGTCTACGGATGAGACCCCAAAAAGTAGAGTTGAGTGCTCAAAACAAACCCCCGACTCAGACGCTGCAAGAGGATTTTTCCCGGGGCACATCATATGGCAAAGAATCAGGAAGATGGAAGGAGGTAACAGCTGCCGTTACAACTTACATCTGCAAAGACATGTCCAGAATTTACACGTTCGAGAAACGGGAGTTTCTTGATTTGGTGCTAACACTCGACCCAAGAAAATCTGCTATATCGTGATATGCATCGTTATCGGGATATGAAATTACCTATATCGGGATATGAGaatttggccatatcgcccagccctaggtGACGCTCCTGACAAGGAGAGGTGGCCTAAATATTGCAGCCATGTCATCCCTCACACAACAACTGAGGACTGCTCCAAAGTACGCCAATTTGCAAAAAAAGCTGGGGAAAAAACTAAAATGTGGAAAGCACTAGCGAAATGGAGGCACGACCACACACCATCCCAGCTCGTTACCAGACTGGTTGTTATGATGACAGCAAGCAATATCCCACAAAAAGGAAAAGTCTCCAAAGTGTCCAGTGAACCACAAACTGTGTCATGCAGTGAGTATTGAGAGGAACCAACATTTTGGACAGTGACCTACACTCTATGGCCAAAGGTCTACCAACCAAAACAACAACTGGCGAAGTAGCGCTACCTGCAGCATCCAGTCTCCAACAAAAGGAATCTGCATCCACAAGTGCCGTGCAGTCTCAGGAGATAATTGCAATGATGTCTtgttagtactgtacatgttcacCTGTTATTTAACAGTACTTTGGTCAAAATAGCAACTCCCCTTGAATCCTTTCTGCTTAAACCCCGTGTTTAATTACTATGTGTTATGTGTCTCCGTTCTAATCAATGTCGTCTTGCTAAGCCTTCCAGACACAGATACTGATGAAGCGAGACATTATAATTGCGAATCAGCAAGAGCAACTGAGGCTCCTTAATGCTACAAGGCCATCGACCACAGCTGAGGACCTCGACATTCTGCAATCACCGTTAGACTCTGTGGCTGATCTGAAGCTACTGTGTAGCGGAGCTCAACAGAGGAGAATCTTCGCAAACAATTGACCACAGCACCTGAAAtaacggagagagacagaaggagcaCAAGCACAGAGTCGACCCTTAAGCCTTTTGACTAAAGAGTACATTTTTATTAAATGTCCAGTGGTAAAAAGGGAAATAATGTAATTCACGGCTAATCCAATTATAGTTCATCAAGAGTTAGTAATTAACagttgtatattgtattttgtatttccTTGTTGGTTAAATGAATCAAATGTTATCTATAAGAGACCCCTTTTCAGTCATGTATGTGGCAAAAATATTATTGATGTAAAGGTCTGCAATAGTAGAAATGTCCTTTCTCTTCCAAAATAAAAAAGTGTTGTCAGTTAGTGGGGGGAGCATGGTCACGGCAAATAGGAGTACAGACAGAGGTCTCCGGGAGACCAAATGTTTTCCTTATTTGATACCAAATGTCATGATTTTTTTTGCATAAAGTTATTGCCGTAATACCTGTTAGTTGATGAAAAGAGAAGTGCTGGAAGAGAGATGTAGTGTATATCTTCTTCAATAGCGAGCCATGAAGGGGTGGAGAGTTCTACTATGCCAGGGTATACATCCTGCCAATAAAGTCAGTGCTCTAGCATTTGCTGCCCAATAATAATGCTGAAAATTTGGCAGGCTCAGACCCCCTAATTGTTTGGGCTTGATTATACGTTTAGAGATACGGTGTACTTTGTATCCCCACACAAAAGGCAGATAATAAAATCCAAGGATTTGAAAAAGCTTTACTTAAAAATATAGGCAGAttctgaaagagagaaagaaatctGGGGAATGTAACCATTTTAATAGCGTGCCTCTATGTTGCGCTTCAGCTTGACGAGGTAGTTCAATTTATAAATCAATTTAGAGTCCTTAGGGATGATAACCCCTAAATATTACATTTAGTCACGTGTGATTTAAAAGGTATATGTTTAAGGAACTCTGGGTTTAAGTCACCTTTAGGAGGCATGAATTCACTTTTATCCCAGTTTATGGTGTACCGAGAGTTCTCCAAATTATTCAATGAGATCCAACAGCGGTGGAAGTGACTCTTCGGGGCGTGAGACCAACAAGATGATGTGCATAGAGCGAGAATCGGTGATCAACCTTGCCTATGTTTAGAGGAGCAATGGCAGGATGGCTGCTGATACTGATAGCTAGGGGTTCCATAGCAATGGTGAATAGCAATGGACTCAAGGGGCATCCCTGGCAGCAGGAACGTTGAAGTGAAAACGGAGGTGATTTATTGTAATTTGTGAAAACTGAAGCCGTCGGGCACGCAGAGTATTTCAACCCAAGAGACAAAACTCACCCAAACCAAACTTGGTCAAATGCTTTTTGAGCGTCAAGTGCAAGTATTGCAACTTTAGAATCTTTGTCATGTCTGGAATACATGATATTCAGTCGACTAATGTTGTAAAATGAAAATCTGCCTGCGATAAAACCAGTTTGGTCATGATGAATTATAGTCGAAATGCATTTATTTAGTCTGTTCGCGAGTATTTTAGTAAACACCTCGAGTTCACATCCGAGGAGGGCAATAGGACGATATGAAGATGGATCGGCATCTTTATCTTTCTTTAATATTAGGGAGATATTAGTTTCAATGGAGTGTTTAAACAGAGGAGTAACCTTTTCTGAATAAACTTTGTAAAACTTCATACCAAAGCCATCAGTGCCAGCCGCTTTCCCATTAGGGAAGGAACATACTGCAGAGACAACCTCTTCGAAAGTTCTCTGCATTTAGCTCCCTTTGAGCAGCGCCGCATAATTTAGGTAGGGAAAGGGAATGGCGGAAATCAGACATTTTTGCGGTATCTGCAGTGGTCTTTGAGGTGTAGAGGTCTTGATAAAACGTTGTGAAATGTGTTAATTCCTTTTGGGTCCGTAGTAACAGCTCCTGTACTAGATTTAATTCTATGACTAGCTCTATTGATTGGCCTGTATACCTCTCAGCTGGTGTGCCAGTAGTTTTTCCCGGTTTGTCACCCAACTCAAAGTGTTTGTTTAATCTTTAATAGCATTGTGTTTACTTGGTTAGAGAAAAtagtattgtattcatattttagTCATTCAACTTGGCGCTTCTACATAGACTCTCTCAAGCTCCGGTAGCTGGGCCTCAATTTCTAATCTTCTCTGCaccgaggtaaagacagtttcaaGTTGGATATTAGACGGATATTCTCGCTTCAAACTTCAAtagctttcaaaccacttgagccaAATAAGTGTCATGATGTAGGAAAAATTGCGGGAAACATTGCACTGGTCATATTTTCACGATTTGGACATTCATTCACTTTCCAAAGCTAATTAACATTTGGAAATGTGAGCGACATCTTGTATTCCTAGTTGAATTAGTTAGGGAGTGTAAACCAAGTACAAACTTTTTTTACattcaaatttcaatagctccttggtcatgtgacctactgacctcaACCAAGGTTCAGAATGTTCACTGACTACCagttagtttgtccattttcactTGATTTTACATGAATTTTTATAAAATTTTACATTTCAGTAGCTCCTTGGttatgtgacctactgacttcaaagaaggttcagaatgtacactcagtgggcaagtcagatccgtaatgTCGgaataaggattggctctaagggctaggttggtcgggctggggtgcgaagcgggacTCTCGCCGCGGCTGGAGAGCAGTCGCTCCGTCGCCCTCTCGCCGCCGGAAGTTcattgtgcggcccatctcgcgGTCTGTTGTGCGTGGTCTCGCAAGTGGATGCGTGCGGATTCGTCAGGGTGGTGTCCGTCAGCGGGCTTGGATCCGCGGACAGGGGTTGGATCCGGCGGTTGGTGACGGCGACTCTGGACCGCGCCGGGCCCTTCTCGcagatctccccagctacggcgCTCGCCGGTCCTGTTCGTGCTGGGTCTCATTGGCTCCTatcagctgacttagaactgttGATGCAATGTGATTTCtccccagtgctctgaatgtcaaagtgaagaaattcaatgaagcgcgggtaaacggtgGGAGTAACAATGACTCTCTTAAGGAGTCCTTAGCCTTAGTAAGGGAGATAACGAGGTAGCCCTCTAGCAGGGCTCTTCGAATCCCTCCCTGTATGTCACCTGTTGTCGCTAACGATGCAAACCAAAACGGGAGTTACCTCGTTACTAGTCCGTACGCAAAGAGAGTCTTGCAGATGGTGATGGGTGTTGATTGTTAACGGTAGGCGGAAGTCGGTCCTGGAATATGGGACTTTCGGTCAAGCATAAAAATGTGAGGGGGGGGGGTTCCACCAGACTCAATGATTTGCTGCGGGGCTCTTGTAAACTAATCCTGaccttgacaggaagccaatcAGAGAATGATGTCTC
>XR_005034620.1
GAAGCTGACAAGAGGTGatgctagggctgggcgatatggcgaTATATATCGTGTGACAATAGAAAAACGCATATGATTTCATATTATGCTGTATCGTTTATTTCGATGTGTCGCAAATCACTCTTTACGGCAATATTTTTCGTCAATTGGACGACACTTTGCGTGCCGTGTGGAAGGAAATGTGCAACACTAACAAACATGGAGGAGAGTGAATGTGACACAGAGCACGGAGACACGGAGCTCGTACCTAAAGGAGGGGTCACATGGACGTGGTTTGGGTATGAAAAGTCTGACACGGACCAGAAAACCGCCCTCTGCAAAATATGCCGCAGGCCGGTcctgacaacaggctcaaacaccagtAACCTATTTTACCACCTACGCAAGAATCACGTGAAACAGTACGGAGAGAGTCTACGGATGAGACCCCAAAAAGTAGAGTTGAGTGCTCAAAACAAACCCCCGACTCAGACGCTGCAAGAGGATTTTTCCCGGGGCACATCATATGGCAAAGAATCAGGAAGATGGAAGGAGGTAACAGCTGCCGTTACAACTTACATCTGCAAAGACATGTCCAGAATTTACACGTTCGAGAAACGGGAGTTTCTTGATTTGGTGCTAACACTCGACCCAAGAAAATCTGCTATATCGTGATATGCATCGTTATCGGGATATGAAATTACCTATATCGGGATATGAGaatttggccatatcgcccagccctaggtGACGCTCCTGACAAGGAGAGGTGGCCTAAATATTGCAGCCATGTCATCCCTCACACAACAACTGAGGACTGCTCCAAAGTACGCCAATTTGCAAAAAAAGCTGGGGAAAAAACTAAAATGTGGAAAGCACTAGCGAAATGGAGGCACGACCACACACCATCCCAGCTCGTTACCAGACTGGTTGTTATGATGACAGCAAGCAGTAAGTtgattatacactgagtatattaACATAGGCACAGATCCGATGCATATGACACGTTTTCTGTTTTGTATCTAGCAACTGATATAGATGAGTTCTTTATGGAACCCTGCTTTCCAGAGAGAACTTTACGTTTACCTCTACCACCCAGATGTCAGGACACAAATGAAGATATCCCACAAAAAGGAAAAGTCTCCAAAGTGTCCAGTGAACCACAAACTGTGTCATGCAGTGAGTATTGAGAGGAACCAACATTTTGGACAGTGACCTACACTCTATGGCCAAAGGTCTACCAACCAAAACAACAACTGGCGAAGTAGCGCTACCTGCAGCATCCAGTCTCCAACAAAAGGAATCTGCATCCACAAGTGCCGTGCAGTCTCAGGAGATAATTGCAATGATGTCTtgttagtactgtacatgttcacCTGTTATTTAACAGTACTTTGGTCAAAATAGCAACTCCCCTTGAATCCTTTCTGCTTAAACCCCGTGTTTAATTACTATGTGTTATGTGTCTCCGTTCTAATCAATGTCGTCTTGCTAAGCCTTCCAGACACAGATACTGATGAAGCGAGACATTATAATTGCGAATCAGCAAGAGCAACTGAGGCTCCTTAATGCTACAAGGCCATCGACCACAGCTGAGGACCTCGACATTCTGCAATCACCGTTAGACTCTGTGGCTGATCTGAAGCTACTGTGTAGCGGAGCTCAACAGAGGAGAATCTTCGCAAACAATTGACCACAGCACCTGAAAtaacggagagagacagaaggagcaCAAGCACAGAGTCGACCCTTAAGCCTTTTGACTAAAGAGTACATTTTTATTAAATGTCCAGTGGTAAAAAGGGAAATAATGTAATTCACGGCTAATCCAATTATAGTTCATCAAGAGTTAGTAATTAACagttgtatattgtattttgtatttccTTGTTGGTTAAATGAATCAAATGTTATCTATAAGAGACCCCTTTTCAGTCATGTATGTGGCAAAAATATTATTGATGTAAAGGTCTGCAATAGTAGAAATGTCCTTTCTCTTCCAAAATAAAAAAGTGTTGTCAGTTAGTGGGGGGAGCATGGTCACGGCAAATAGGAGTACAGACAGAGGTCTCCGGGAGACCAAATGTTTTCCTTATTTGATACCAAATGTCATGATTTTTTTTGCATAAAGTTATTGCCGTAATACCTGTTAGTTGATGAAAAGAGAAGTGCTGGAAGAGAGATGTAGTGTATATCTTCTTCAATAGCGAGCCATGAAGGGGTGGAGAGTTCTACTATGCCAGGGTATACATCCTGCCAATAAAGTCAGTGCTCTAGCATTTGCTGCCCAATAATAATGCTGAAAATTTGGCAGGCTCAGACCCCCTAATTGTTTGGGCTTGATTATACGTTTAGAGATACGGTGTACTTTGTATCCCCACACAAAAGGCAGATAATAAAATCCAAGGATTTGAAAAAGCTTTACTTAAAAATATAGGCAGAttctgaaagagagaaagaaatctGGGGAATGTAACCATTTTAATAGCGTGCCTCTATGTTGCGCTTCAGCTTGACGAGGTAGTTCAATTTATAAATCAATTTAGAGTCCTTAGGGATGATAACCCCTAAATATTACATTTAGTCACGTGTGATTTAAAAGGTATATGTTTAAGGAACTCTGGGTTTAAGTCACCTTTAGGAGGCATGAATTCACTTTTATCCCAGTTTATGGTGTACCGAGAGTTCTCCAAATTATTCAATGAGATCCAACAGCGGTGGAAGTGACTCTTCGGGGCGTGAGACCAACAAGATGATGTGCATAGAGCGAGAATCGGTGATCAACCTTGCCTATGTTTAGAGGAGCAATGGCAGGATGGCTGCTGATACTGATAGCTAGGGGTTCCATAGCAATGGTGAATAGCAATGGACTCAAGGGGCATCCCTGGCAGCAGGAACGTTGAAGTGAAAACGGAGGTGATTTATTGTAATTTGTGAAAACTGAAGCCGTCGGGCACGCAGAGTATTTCAACCCAAGAGACAAAACTCACCCAAACCAAACTTGGTCAAATGCTTTTTGAGCGTCAAGTGCAAGTATTGCAACTTTAGAATCTTTGTCATGTCTGGAATACATGATATTCAGTCGACTAATGTTGTAAAATGAAAATCTGCCTGCGATAAAACCAGTTTGGTCATGATGAATTATAGTCGAAATGCATTTATTTAGTCTGTTCGCGAGTATTTTAGTAAACACCTCGAGTTCACATCCGAGGAGGGCAATAGGACGATATGAAGATGGATCGGCATCTTTATCTTTCTTTAATATTAGGGAGATATTAGTTTCAATGGAGTGTTTAAACAGAGGAGTAACCTTTTCTGAATAAACTTTGTAAAACTTCATACCAAAGCCATCAGTGCCAGCCGCTTTCCCATTAGGGAAGGAACATACTGCAGAGACAACCTCTTCGAAAGTTCTCTGCATTTAGCTCCCTTTGAGCAGCGCCGCATAATTTAGGTAGGGAAAGGGAATGGCGGAAATCAGACATTTTTGCGGTATCTGCAGTGGTCTTTGAGGTGTAGAGGTCTTGATAAAACGTTGTGAAATGTGTTAATTCCTTTTGGGTCCGTAGTAACAGCTCCTGTACTAGATTTAATTCTATGACTAGCTCTATTGATTGGCCTGTATACCTCTCAGCTGGTGTGCCAGTAGTTTTTCCCGGTTTGTCACCCAACTCAAAGTGTTTGTTTAATCTTTAATAGCATTGTGTTTACTTGGTTAGAGAAAAtagtattgtattcatattttagTCATTCAACTTGGCGCTTCTACATAGACTCTCTCAAGCTCCGGTAGCTGGGCCTCAATTTCTAATCTTCTCTGCaccgaggtaaagacagtttcaaGTTGGATATTAGACGGATATTCTCGCTTCAAACTTCAAtagctttcaaaccacttgagccaAATAAGTGTCATGATGTAGGAAAAATTGCGGGAAACATTGCACTGGTCATATTTTCACGATTTGGACATTCATTCACTTTCCAAAGCTAATTAACATTTGGAAATGTGAGCGACATCTTGTATTCCTAGTTGAATTAGTTAGGGAGTGTAAACCAAGTACAAACTTTTTTTACattcaaatttcaatagctccttggtcatgtgacctactgacctcaACCAAGGTTCAGAATGTTCACTGACTACCagttagtttgtccattttcactTGATTTTACATGAATTTTTATAAAATTTTACATTTCAGTAGCTCCTTGGttatgtgacctactgacttcaaagaaggttcagaatgtacactcagtgggcaagtcagatccgtaatgTCGgaataaggattggctctaagggctaggttggtcgggctggggtgcgaagcgggacTCTCGCCGCGGCTGGAGAGCAGTCGCTCCGTCGCCCTCTCGCCGCCGGAAGTTcattgtgcggcccatctcgcgGTCTGTTGTGCGTGGTCTCGCAAGTGGATGCGTGCGGATTCGTCAGGGTGGTGTCCGTCAGCGGGCTTGGATCCGCGGACAGGGGTTGGATCCGGCGGTTGGTGACGGCGACTCTGGACCGCGCCGGGCCCTTCTCGcagatctccccagctacggcgCTCGCCGGTCCTGTTCGTGCTGGGTCTCATTGGCTCCTatcagctgacttagaactgttGATGCAATGTGATTTCtccccagtgctctgaatgtcaaagtgaagaaattcaatgaagcgcgggtaaacggtgGGAGTAACAATGACTCTCTTAAGGAGTCCTTAGCCTTAGTAAGGGAGATAACGAGGTAGCCCTCTAGCAGGGCTCTTCGAATCCCTCCCTGTATGTCACCTGTTGTCGCTAACGATGCAAACCAAAACGGGAGTTACCTCGTTACTAGTCCGTACGCAAAGAGAGTCTTGCAGATGGTGATGGGTGTTGATTGTTAACGGTAGGCGGAAGTCGGTCCTGGAATATGGGACTTTCGGTCAAGCATAAAAATGTGAGGGGGGGGGGTTCCACCAGACTCAATGATTTGCTGCGGGGCTCTTGTAAACTAATCCTGaccttgacaggaagccaatcAGAGAATGATGTCTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC102079249 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002475284.2 False 4871 mRNA 0.44 7 35943714 35950398
XR_005034620.1 True 5042 mRNA 0.44 7 35943714 35950398

Neighbor

gene id symbol gene type direction distance location
LOC110535623 LOC106578698 coding upstream 49923 35868265 ~ 35893791 (+)
LOC110535011 NA coding upstream 77631 35720089 ~ 35866083 (+)
adcyap1 LOC100135955 coding upstream 342106 35595222 ~ 35601608 (+)
LOC110535619 NA coding upstream 422131 35514475 ~ 35521583 (+)
LOC110535618 LOC106578705 coding upstream 501478 35428021 ~ 35442236 (+)
mlrn mlrn coding downstream 55687 36006085 ~ 36011517 (+)
LOC110535012 LOC106590147 coding downstream 62248 36012646 ~ 36019822 (+)
LOC110535013 LOC105015730 coding downstream 114814 36065212 ~ 36075733 (+)
LOC110535630 LOC106578722 coding downstream 200682 36151080 ~ 36157644 (+)
LOC110535631 LOC106578690 coding downstream 214391 36164789 ~ 36179098 (+)
G972271 NA non-coding upstream 62365 35881083 ~ 35881349 (+)
G972266 NA non-coding upstream 68038 35875476 ~ 35875676 (+)
G972252 NA non-coding upstream 89008 35854401 ~ 35854706 (+)
G972192 NA non-coding upstream 181207 35762261 ~ 35762507 (+)
G972427 LOC106578695 non-coding downstream 22633 35973031 ~ 35973610 (+)
G972454 NA non-coding downstream 67831 36018229 ~ 36018554 (+)
G972455 LOC108238713 non-coding downstream 76002 36026400 ~ 36026768 (+)
G972458 NA non-coding downstream 79566 36029964 ~ 36030298 (+)
G972460 NA non-coding downstream 81752 36032150 ~ 36032396 (+)
G970489 LOC106578645 other upstream 1421374 34516457 ~ 34522340 (+)
G970283 NA other upstream 1763666 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 1772727 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 2148653 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 2338904 33604513 ~ 33604810 (+)
G972725 NA other downstream 299575 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 1591698 37542062 ~ 37543202 (+)
G973918 NA other downstream 1700740 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 1881123 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 2070051 37866715 ~ 38045713 (+)

Expression


Co-expression Network