Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110536619 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 36545398 ~ 36584763 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002475488.2 | True | 512 | mRNA | 0.43 | 2 | 36545398 | 36584763 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c-myc | LOC106578682 | coding | upstream | 9656 | 36532933 ~ 36535742 (+) |
| LOC110535639 | LOC106578683 | coding | upstream | 55886 | 36475502 ~ 36489512 (+) |
| LOC110535637 | LOC106578684 | coding | upstream | 83497 | 36344726 ~ 36461901 (+) |
| LOC110535634 | LOC106578686 | coding | upstream | 279324 | 36255223 ~ 36266074 (+) |
| sox17 | LOC106578689 | coding | upstream | 312004 | 36231115 ~ 36233394 (+) |
| LOC118937471 | NA | coding | downstream | 122689 | 36707452 ~ 36707506 (+) |
| LOC110535645 | NA | coding | downstream | 243718 | 36828481 ~ 36829107 (+) |
| LOC110535646 | LOC106578679 | coding | downstream | 331418 | 36916181 ~ 36946510 (+) |
| LOC110535649 | LOC106578675 | coding | downstream | 362492 | 36947255 ~ 37051375 (+) |
| LOC110535651 | LOC106578671 | coding | downstream | 530362 | 37115125 ~ 37222524 (+) |
| G972749 | NA | non-coding | upstream | 193547 | 36289914 ~ 36351851 (+) |
| G972742 | vps41 | non-coding | upstream | 242489 | 36302097 ~ 36302909 (+) |
| G972744 | vps41 | non-coding | upstream | 249702 | 36292387 ~ 36295696 (+) |
| G972741 | NA | non-coding | upstream | 253890 | 36290910 ~ 36291508 (+) |
| G972727 | NA | non-coding | upstream | 292614 | 36252580 ~ 36252784 (+) |
| G973455 | NA | non-coding | downstream | 248032 | 36832795 ~ 36833926 (+) |
| G973611 | NA | non-coding | downstream | 500079 | 37084842 ~ 37086656 (+) |
| G973659 | NA | non-coding | downstream | 546142 | 37130905 ~ 37134701 (+) |
| G973716 | NA | non-coding | downstream | 646922 | 37231685 ~ 37231898 (+) |
| G973721 | NA | non-coding | downstream | 652031 | 37236794 ~ 37237025 (+) |
| G972725 | NA | other | upstream | 294812 | 36249973 ~ 36250586 (+) |
| G970489 | LOC106578645 | other | upstream | 2023058 | 34516457 ~ 34522340 (+) |
| G970283 | NA | other | upstream | 2365350 | 34179703 ~ 34180048 (+) |
| G970054 | LOC106578636 | other | upstream | 2374411 | 34163816 ~ 34170987 (+) |
| G969752 | LOC106578632 | other | upstream | 2750337 | 33794375 ~ 33795061 (+) |
| LOC110535658 | NA | other | downstream | 957333 | 37542062 ~ 37543202 (+) |
| G973918 | NA | other | downstream | 1066375 | 37651138 ~ 37679368 (+) |
| lztfl1 | LOC106590188 | other | downstream | 1246758 | 37813177 ~ 37835340 (+) |
| LOC110535015 | LOC106578726 | other | downstream | 1435686 | 37866715 ~ 38045713 (+) |
| G974184 | NA | other | downstream | 1473035 | 38057798 ~ 38063100 (+) |
