Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110535661 |
| gene name | LOC106578659 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 37735411 ~ 37809752 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| dnaJ homolog subfamily C member 13-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021620804.2 | False | 8031 | mRNA | 0.54 | 55 | 37735411 | 37809750 |
| XM_021620800.2 | False | 8080 | mRNA | 0.54 | 56 | 37735411 | 37809751 |
| XM_021620801.2 | False | 8077 | mRNA | 0.54 | 56 | 37735411 | 37809751 |
| XM_021620802.2 | False | 8047 | mRNA | 0.54 | 55 | 37735411 | 37809751 |
| XM_021620803.2 | False | 8185 | mRNA | 0.54 | 57 | 37735411 | 37809751 |
| XM_021620805.2 | False | 8373 | mRNA | 0.54 | 56 | 37735411 | 37809752 |
| TU1110285 | True | 833 | TUCP | 0.56 | 7 | 37739875 | 37745426 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937348 | NA | coding | downstream | 190 | 37721569 ~ 37735221 (-) |
| LOC118937347 | LOC106578660 | coding | downstream | 15696 | 37711188 ~ 37719715 (-) |
| LOC110535660 | LOC106578660 | coding | downstream | 24287 | 37601439 ~ 37711124 (-) |
| LOC110535659 | LOC106578663 | coding | downstream | 160530 | 37565345 ~ 37574881 (-) |
| LOC110535650 | LOC106578672 | coding | downstream | 626128 | 37085679 ~ 37109283 (-) |
| LOC110535662 | LOC106595913 | coding | upstream | 3832 | 37813584 ~ 37816547 (-) |
| LOC118937483 | NA | coding | upstream | 54011 | 37863763 ~ 37863910 (-) |
| LOC110535666 | LOC106578727 | coding | upstream | 274161 | 38083913 ~ 38103834 (-) |
| LOC110535667 | LOC106578728 | coding | upstream | 308935 | 38118687 ~ 38132691 (-) |
| LOC110535668 | LOC106578729 | coding | upstream | 361266 | 38171018 ~ 38199082 (-) |
| G974854 | NA | non-coding | downstream | 89571 | 37576457 ~ 37645840 (-) |
| G974845 | NA | non-coding | downstream | 176253 | 37558865 ~ 37559158 (-) |
| G974844 | NA | non-coding | downstream | 177228 | 37557982 ~ 37558183 (-) |
| G974821 | NA | non-coding | downstream | 192210 | 37540235 ~ 37543201 (-) |
| G975069 | gli3 | non-coding | upstream | 166163 | 37975915 ~ 38010659 (-) |
| G975103 | LOC106578726 | non-coding | upstream | 235283 | 38041406 ~ 38045662 (-) |
| G975109 | NA | non-coding | upstream | 267102 | 38076854 ~ 38077083 (-) |
| G975139 | NA | non-coding | upstream | 327747 | 38137499 ~ 38137904 (-) |
| G975146 | NA | non-coding | upstream | 334668 | 38144420 ~ 38144770 (-) |
| G974756 | NA | other | downstream | 319776 | 37414378 ~ 37415635 (-) |
| G974622 | LOC106578671 | other | downstream | 520515 | 37213884 ~ 37214896 (-) |
| G972383 | LOC106578698 | other | downstream | 1862153 | 35872669 ~ 35873258 (-) |
| LOC110535616 | LOC106578707 | other | downstream | 2892899 | 34810223 ~ 34978953 (-) |
| G975110 | NA | other | upstream | 268099 | 38077851 ~ 38078527 (-) |
| G979041 | NA | other | upstream | 3463337 | 41273089 ~ 41273427 (-) |
| G980514 | NA | other | upstream | 4664058 | 42473810 ~ 42563730 (-) |
| kiaa0825 | kiaa0825 | other | upstream | 4763509 | 42425475 ~ 42591782 (-) |
| G974977 | NA | non-coding | upstream | 52839 | 37798265 ~ 37798930 (-) |
| G971137 | NA | other | downstream | 2900949 | 34836972 ~ 34838926 (-) |
