LOC118937439


Basic Information

Item Value
gene id LOC118937439
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 37836986 ~ 37843507 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034789.1
GTTGGGGAATGCCGCACTAGGCAGCGATGCGTTCGGTGTGCAGTATATGTTCAACTCTTCGTTGCTTTAACGTGCGGTGGTACACATGGAAGTACCCACACACATTCCAACTAGCTAGCTTTTATCTAGTTGAAAAGTGAAACATTGACAGTGGTGATGAGAGTGACACCAAAGAGGAAGTCGTCACTGAAGCCCACTCTGAGACCAACACGTCTGATGCGGAGTCTGAGTCCTAGAGTTCAGAGTTCAGACCTAAGCAGCACAGCATGGTGACCCTATATAACCAATACACTCTGCTTCATCATGTAGGATTTCATAGTGGTCATTATTGTGTTCTGGTGAATAGCAAAATGTCTGTTAGAATGTCCATGATGCACGCAGAATGTAGATATAGTGTTTCCTTCTGTGTGATTTGAATAGTTTATGCAAGAAGCCCAATATCATTTGGTGACTGGCTTTGTCAatatttaagtgtgtgtgtgtggatgggggcATGTGTTTTCAAGAATTACTCAAGTTTAACGGAGATGTCTGTCCTGAGGTTGCACAGGTGTTCGCAGCTACCACGCAGGTTACAGCTCCAGTAACACTGCTTTGCCGTGTGTCAGTTGGAACTGATGTCACCACCAACACCTCTCGTCTGTCACTTTATTCATGAGTTTGTTTTCATAGGCACCCTGAAGCATCCTTAGCCCAGCTTACGGCCATGGCTGTTTCACTTTGCCTCTTTGTGGTCCAGACCGAGAAACGCAACCTGAAAGAGGAGACTGGTAGCTACTCTCAACCGCCAGCATCTCACCCCTGGGTCCTATGAGAAACCTGAGACAGAAGCTGCTACATCAAGTTGGGTAGTGAAACTTTTATGAGGATTCCACACTTGTCTGCACTATGCTCTGTTTTACTCAGTGCCCAAATATGTGTTGAAACACAGGAGGTTAGAAAATACTCTTCCTTACACCTACTCACAGGAAACCAACAGACATGAATGACTTTCCCTCTCCCTTTATGTTTCTATCATAACAGTCACTTTGGCTTTGGAAACTCAAAAGATGATaacatatatttatttgtattgaTTTATTTTCACCAAAGAAAACAAGTAATAGACAGCAATACAGATAAAAACAATGCAATCTAAAAGCAATATGCAGGTGTGGTTGGAAGCCTGAAATGAAAACCACACATGGTATCAACAATATCAAGTTGTCAAACTATTGATTGTTGCTGTAACCTGGAACACAGCCTGATTAAAAACATAAAATCTTTAAATGAATTAGATCAAAACTATCACTACTGCCTCTTCGTTTTGATGTGTCCATAAACAAGTCCTAGAATACCGGGAACCTTTGATGCAGTGTTCTTGCGGTATACTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034789.1 True 1374 mRNA 0.42 3 37836986 37843507

Neighbor

gene id symbol gene type direction distance location
lztfl1 LOC106590188 coding upstream 1646 37813177 ~ 37835340 (+)
LOC110535658 NA coding upstream 293796 37542062 ~ 37543202 (+)
LOC110535657 LOC106578664 coding upstream 298127 37522651 ~ 37538859 (+)
LOC110535656 LOC106578665 coding upstream 323651 37384483 ~ 37513335 (+)
LOC110535654 LOC106578667 coding upstream 476920 37335611 ~ 37360066 (+)
LOC110535665 LOC106578656 coding downstream 3640 37847147 ~ 37850426 (+)
LOC110535015 LOC106578726 coding downstream 23208 37866715 ~ 38045713 (+)
LOC110535669 impa1 coding downstream 355619 38199126 ~ 38217258 (+)
LOC110535674 LOC106578734 coding downstream 508064 38351571 ~ 38497111 (+)
LOC110535673 enkur coding downstream 782754 38626261 ~ 38631703 (+)
G973995 NA non-coding upstream 60095 37752703 ~ 37776891 (+)
G973853 NA non-coding upstream 271014 37563105 ~ 37565972 (+)
G973772 NA non-coding upstream 391286 37348459 ~ 37445700 (+)
G974074 NA non-coding downstream 43453 37886960 ~ 37887426 (+)
G974090 NA non-coding downstream 64336 37907843 ~ 37908175 (+)
G974095 NA non-coding downstream 71452 37914959 ~ 38005906 (+)
G974112 NA non-coding downstream 93225 37936732 ~ 37939705 (+)
G974165 NA non-coding downstream 174094 38017601 ~ 38017823 (+)
G973918 NA other upstream 157618 37651138 ~ 37679368 (+)
G972725 NA other upstream 1586400 36249973 ~ 36250586 (+)
G970489 LOC106578645 other upstream 3314646 34516457 ~ 34522340 (+)
G974184 NA other downstream 214291 38057798 ~ 38063100 (+)
G976017 NA other downstream 1214169 39057676 ~ 39058011 (+)
G978255 NA other downstream 2924329 40767836 ~ 40768229 (+)
G978396 NA other downstream 3159569 41003076 ~ 41016088 (+)

Expression


Co-expression Network