LOC110535669 (impa1)


Basic Information

Item Value
gene id LOC110535669
gene name impa1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 38199126 ~ 38217258 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935434.1
GTGAGGCACGTGATCAAGAGGAGAGAGCAGCACACGCGCAAGTTGTGGCGGCAACTTTGTACCAtttgtagGTTGTCGTCATCATGGCAGACCCTTGGAAAGAGTGCATGGACCACTGCCTTGAGGTGACCAAAGAGGCTGGGAAGatgaTCCAAGAAGCGTTGCAGAAGGACATCTCCATCATGCAGAAGAGCTCTCCTGTGGACCTGGTCACTGAGACCGACCAGAAGGTGGAGCAGCTCATCATCTCCTCCATCAAGGAGAAGTTCCCCACACACAGTTTTATAGGTGAAGAGTCTGTAGCGGCGGGAGCAACCAGCAACCTAACTGATAATCCCACCTGGATCATCGACCCCATTGATGGGACCACCAACTTTGTCCACAGATTCCCCTTTGTCTCTATGTCGATTGGTTTTGCTGTGAAGAAAGAGATAGAGTTTGGCATTGTCTACAGCTGCCAAGAGGGCAAGATGTACACAGCACGGAAGGGGAAAGGGTCATTCTGTAATGGAGAACCCATCAAAGTGTCTGGGCAAGAAGACATCACCAAGTCCTTGGTCCTGACAGAGATGGGCTTTAAGAAGGATCCAGAGCACTTCAAAACCATGATGGGCAACATCGAGACTATCCTCACCATCCCTGTGCACGGCATCCGCTCGCCGGGTAGTGCGGCAGTCAACATGTGCCTGGTGGCGTGTGGAGCGGCTGATGCCTACTACCACATGGGCATACACTGCTGGGACATGGCTGGAGGAGCTGCCATCATCAGAGAGGCTGGGGGTGTCATCATGGACATCTCAGGAGGCCCATTTGACCTGATGTCCAGGAGGCTGATCATTGCCAGCAGCAGAACCATCGCAGAGCGCATCTCCCAGGTGATAAAAGCATTCCCCGTAGGAAGGGACGACATCGAGGGATAGAgtaccatcacacacacatgcatgcacagagAGACTGACACATGGCTGCAGGTGCATGCGCACCCAgcagaacacacatacacatgtttagatTAGTGAGGTCAAGATCCTCTCTGCACCTTAATTGTTAAACTGGTGGTATTAACCTTTATCTGAATGCACCTCAGTGGATTTGCGAAAACCTATCAATGAAGACCAACTTTATTCATTTAATTGACTGTTTGCCCCTCAAGGGCTTTGACTTGCATCTCATTTTTTGGGGGCATTTAAGTGAGAACAAGATTAGAAAATGTGGTCATTGTAGACCAAGACATTTTCTGTCTCAATCATACACCACatggccaaaggtatgtggacataccttcaaatttgtggatttgttTATTTTAGCCACACTCATTGCTGACAAGTGTttaaaatcaagcacaccgccatgcaatctccatagacaaacattggcagtaaaatggccttactgaagagctcagtgactttcaacgtggcactgtcattggatgccatctttccaataAGTTAGTTTGTCAGATTtatgctctgctagagctgcccaggtcTATTATTGTATTGTGaagtgtattgtgtattgtattgtgaagtggaaacgtctaggagcaacaacggctcagccgcgaagtggtaggccgcacaagctcacagaacaagactgctg
>XM_036935432.1
TATTAATACTCTGGAACTGATGCACATCAAGAAATAAGGGAGACAAAGCACTAGAAAACGACGTTGGGCGCACTAGAGCGCATActattaccagtcaaaagtttggacacacctgatcattcaaggggttttctttcgttttacatcgtagaataatagtgaagacatcaacactatgaaataacacatatagaatcatgtagaaaccaaaatagtgttaaagaaattcttcaaagtagccactctttgccttgaccGCTATGCACGCCCTTGGTATTCTTACAACCACCTTCAAGAGGTTGTCGTCATCATGGCAGACCCTTGGAAAGAGTGCATGGACCACTGCCTTGAGGTGACCAAAGAGGCTGGGAAGatgaTCCAAGAAGCGTTGCAGAAGGACATCTCCATCATGCAGAAGAGCTCTCCTGTGGACCTGGTCACTGAGACCGACCAGAAGGTGGAGCAGCTCATCATCTCCTCCATCAAGGAGAAGTTCCCCACACACAGTTTTATAGGTGAAGAGTCTGTAGCGGCGGGAGCAACCAGCAACCTAACTGATAATCCCACCTGGATCATCGACCCCATTGATGGGACCACCAACTTTGTCCACAGATTCCCCTTTGTCTCTATGTCGATTGGTTTTGCTGTGAAGAAAGAGATAGAGTTTGGCATTGTCTACAGCTGCCAAGAGGGCAAGATGTACACAGCACGGAAGGGGAAAGGGTCATTCTGTAATGGAGAACCCATCAAAGTGTCTGGGCAAGAAGACATCACCAAGTCCTTGGTCCTGACAGAGATGGGCTTTAAGAAGGATCCAGAGCACTTCAAAACCATGATGGGCAACATCGAGACTATCCTCACCATCCCTGTGCACGGCATCCGCTCGCCGGGTAGTGCGGCAGTCAACATGTGCCTGGTGGCGTGTGGAGCGGCTGATGCCTACTACCACATGGGCATACACTGCTGGGACATGGCTGGAGGAGCTGCCATCATCAGAGAGGCTGGGGGTGTCATCATGGACATCTCAGGAGGCCCATTTGACCTGATGTCCAGGAGGCTGATCATTGCCAGCAGCAGAACCATCGCAGAGCGCATCTCCCAGGTGATAAAAGCATTCCCCGTAGGAAGGGACGACATCGAGGGATAGAgtaccatcacacacacatgcatgcacagagAGACTGACACATGGCTGCAGGTGCATGCGCACCCAgcagaacacacatacacatgtttagatTAGTGAGGTCAAGATCCTCTCTGCACCTTAATTGTTAAACTGGTGGTATTAACCTTTATCTGAATGCACCTCAGTGGATTTGCGAAAACCTATCAATGAAGACCAACTTTATTCATTTAATTGACTGTTTGCCCCTCAAGGGCTTTGACTTGCATCTCATTTTTTGGGGGCATTTAAGTGAGAACAAGATTAGAAAATGTGGTCATTGTAGACCAAGACATTTTCTGTCTCAATCATACACCACatggccaaaggtatgtggacataccttcaaatttgtggatttgttTATTTTAGCCACACTCATTGCTGACAAGTGTttaaaatcaagcacaccgccatgcaatctccatagacaaacattggcagtaaaatggccttactgaagagctcagtgactttcaacgtggcactgtcattggatgccatctttccaataAGTTAGTTTGTCAGATTtatgctctgctagagctgcccaggtcTATTATTGTATTGTGaagtgtattgtgtattgtattgtgaagtggaaacgtctaggagcaacaacggctcagccgcgaagtggtaggccgcacaagctcacagaacaagactgctg
>XM_036935431.1
GCCAGCCTGCGTGGTAGCTAGGTGGATATTCCTGCCTCAGCCATTGCATTGGCTATCTTGTCAGCAGGTTGTCGTCATCATGGCAGACCCTTGGAAAGAGTGCATGGACCACTGCCTTGAGGTGACCAAAGAGGCTGGGAAGatgaTCCAAGAAGCGTTGCAGAAGGACATCTCCATCATGCAGAAGAGCTCTCCTGTGGACCTGGTCACTGAGACCGACCAGAAGGTGGAGCAGCTCATCATCTCCTCCATCAAGGAGAAGTTCCCCACACACAGTTTTATAGGTGAAGAGTCTGTAGCGGCGGGAGCAACCAGCAACCTAACTGATAATCCCACCTGGATCATCGACCCCATTGATGGGACCACCAACTTTGTCCACAGATTCCCCTTTGTCTCTATGTCGATTGGTTTTGCTGTGAAGAAAGAGATAGAGTTTGGCATTGTCTACAGCTGCCAAGAGGGCAAGATGTACACAGCACGGAAGGGGAAAGGGTCATTCTGTAATGGAGAACCCATCAAAGTGTCTGGGCAAGAAGACATCACCAAGTCCTTGGTCCTGACAGAGATGGGCTTTAAGAAGGATCCAGAGCACTTCAAAACCATGATGGGCAACATCGAGACTATCCTCACCATCCCTGTGCACGGCATCCGCTCGCCGGGTAGTGCGGCAGTCAACATGTGCCTGGTGGCGTGTGGAGCGGCTGATGCCTACTACCACATGGGCATACACTGCTGGGACATGGCTGGAGGAGCTGCCATCATCAGAGAGGCTGGGGGTGTCATCATGGACATCTCAGGAGGCCCATTTGACCTGATGTCCAGGAGGCTGATCATTGCCAGCAGCAGAACCATCGCAGAGCGCATCTCCCAGGTGATAAAAGCATTCCCCGTAGGAAGGGACGACATCGAGGGATAGAgtaccatcacacacacatgcatgcacagagAGACTGACACATGGCTGCAGGTGCATGCGCACCCAgcagaacacacatacacatgtttagatTAGTGAGGTCAAGATCCTCTCTGCACCTTAATTGTTAAACTGGTGGTATTAACCTTTATCTGAATGCACCTCAGTGGATTTGCGAAAACCTATCAATGAAGACCAACTTTATTCATTTAATTGACTGTTTGCCCCTCAAGGGCTTTGACTTGCATCTCATTTTTTGGGGGCATTTAAGTGAGAACAAGATTAGAAAATGTGGTCATTGTAGACCAAGACATTTTCTGTCTCAATCATACACCACatggccaaaggtatgtggacataccttcaaatttgtggatttgttTATTTTAGCCACACTCATTGCTGACAAGTGTttaaaatcaagcacaccgccatgcaatctccatagacaaacattggcagtaaaatggccttactgaagagctcagtgactttcaacgtggcactgtcattggatgccatctttccaataAGTTAGTTTGTCAGATTtatgctctgctagagctgcccaggtcTATTATTGTATTGTGaagtgtattgtgtattgtattgtgaagtggaaacgtctaggagcaacaacggctcagccgcgaagtggtaggccgcacaagctcacagaacaagactgctg
>XM_021620816.2
GATATTACAACGGTATTCAAGTGctggcttttattttgaaggttttGTCATTGCTATAGGAAAATTATGTCATAATTTGTGCTGCTGGCAGAATAGTAGTGCAGAGGTTAGAAAAGGGAAACAATACAGTTGTCGTCATCATGGCAGACCCTTGGAAAGAGTGCATGGACCACTGCCTTGAGGTGACCAAAGAGGCTGGGAAGatgaTCCAAGAAGCGTTGCAGAAGGACATCTCCATCATGCAGAAGAGCTCTCCTGTGGACCTGGTCACTGAGACCGACCAGAAGGTGGAGCAGCTCATCATCTCCTCCATCAAGGAGAAGTTCCCCACACACAGTTTTATAGGTGAAGAGTCTGTAGCGGCGGGAGCAACCAGCAACCTAACTGATAATCCCACCTGGATCATCGACCCCATTGATGGGACCACCAACTTTGTCCACAGATTCCCCTTTGTCTCTATGTCGATTGGTTTTGCTGTGAAGAAAGAGATAGAGTTTGGCATTGTCTACAGCTGCCAAGAGGGCAAGATGTACACAGCACGGAAGGGGAAAGGGTCATTCTGTAATGGAGAACCCATCAAAGTGTCTGGGCAAGAAGACATCACCAAGTCCTTGGTCCTGACAGAGATGGGCTTTAAGAAGGATCCAGAGCACTTCAAAACCATGATGGGCAACATCGAGACTATCCTCACCATCCCTGTGCACGGCATCCGCTCGCCGGGTAGTGCGGCAGTCAACATGTGCCTGGTGGCGTGTGGAGCGGCTGATGCCTACTACCACATGGGCATACACTGCTGGGACATGGCTGGAGGAGCTGCCATCATCAGAGAGGCTGGGGGTGTCATCATGGACATCTCAGGAGGCCCATTTGACCTGATGTCCAGGAGGCTGATCATTGCCAGCAGCAGAACCATCGCAGAGCGCATCTCCCAGGTGATAAAAGCATTCCCCGTAGGAAGGGACGACATCGAGGGATAGAgtaccatcacacacacatgcatgcacagagAGACTGACACATGGCTGCAGGTGCATGCGCACCCAgcagaacacacatacacatgtttagatTAGTGAGGTCAAGATCCTCTCTGCACCTTAATTGTTAAACTGGTGGTATTAACCTTTATCTGAATGCACCTCAGTGGATTTGCGAAAACCTATCAATGAAGACCAACTTTATTCATTTAATTGACTGTTTGCCCCTCAAGGGCTTTGACTTGCATCTCATTTTTTGGGGGCATTTAAGTGAGAACAAGATTAGAAAATGTGGTCATTGTAGACCAAGACATTTTCTGTCTCAATCATACACCACatggccaaaggtatgtggacataccttcaaatttgtggatttgttTATTTTAGCCACACTCATTGCTGACAAGTGTttaaaatcaagcacaccgccatgcaatctccatagacaaacattggcagtaaaatggccttactgaagagctcagtgactttcaacgtggcactgtcattggatgccatctttccaataAGTTAGTTTGTCAGATTtatgctctgctagagctgcccaggtcTATTATTGTATTGTGaagtgtattgtgtattgtattgtgaagtggaaacgtctaggagcaacaacggctcagccgcgaagtggtaggccgcacaagctcacagaacaagactgctg
>XM_021620817.2
AATCGATTGTTGTTACAATTTATAGGGCGGTTATCTGGTCACTAGCTAGCTGTTGTGTATCCTTGCATGATTTAGCTAGTGATCAATCCCGGGAAGACATCATAGCCtgtcagctggctagctaacGTTGTCGTCATCATGGCAGACCCTTGGAAAGAGTGCATGGACCACTGCCTTGAGGTGACCAAAGAGGCTGGGAAGatgaTCCAAGAAGCGTTGCAGAAGGACATCTCCATCATGCAGAAGAGCTCTCCTGTGGACCTGGTCACTGAGACCGACCAGAAGGTGGAGCAGCTCATCATCTCCTCCATCAAGGAGAAGTTCCCCACACACAGTTTTATAGGTGAAGAGTCTGTAGCGGCGGGAGCAACCAGCAACCTAACTGATAATCCCACCTGGATCATCGACCCCATTGATGGGACCACCAACTTTGTCCACAGATTCCCCTTTGTCTCTATGTCGATTGGTTTTGCTGTGAAGAAAGAGATAGAGTTTGGCATTGTCTACAGCTGCCAAGAGGGCAAGATGTACACAGCACGGAAGGGGAAAGGGTCATTCTGTAATGGAGAACCCATCAAAGTGTCTGGGCAAGAAGACATCACCAAGTCCTTGGTCCTGACAGAGATGGGCTTTAAGAAGGATCCAGAGCACTTCAAAACCATGATGGGCAACATCGAGACTATCCTCACCATCCCTGTGCACGGCATCCGCTCGCCGGGTAGTGCGGCAGTCAACATGTGCCTGGTGGCGTGTGGAGCGGCTGATGCCTACTACCACATGGGCATACACTGCTGGGACATGGCTGGAGGAGCTGCCATCATCAGAGAGGCTGGGGGTGTCATCATGGACATCTCAGGAGGCCCATTTGACCTGATGTCCAGGAGGCTGATCATTGCCAGCAGCAGAACCATCGCAGAGCGCATCTCCCAGGTGATAAAAGCATTCCCCGTAGGAAGGGACGACATCGAGGGATAGAgtaccatcacacacacatgcatgcacagagAGACTGACACATGGCTGCAGGTGCATGCGCACCCAgcagaacacacatacacatgtttagatTAGTGAGGTCAAGATCCTCTCTGCACCTTAATTGTTAAACTGGTGGTATTAACCTTTATCTGAATGCACCTCAGTGGATTTGCGAAAACCTATCAATGAAGACCAACTTTATTCATTTAATTGACTGTTTGCCCCTCAAGGGCTTTGACTTGCATCTCATTTTTTGGGGGCATTTAAGTGAGAACAAGATTAGAAAATGTGGTCATTGTAGACCAAGACATTTTCTGTCTCAATCATACACCACatggccaaaggtatgtggacataccttcaaatttgtggatttgttTATTTTAGCCACACTCATTGCTGACAAGTGTttaaaatcaagcacaccgccatgcaatctccatagacaaacattggcagtaaaatggccttactgaagagctcagtgactttcaacgtggcactgtcattggatgccatctttccaataAGTTAGTTTGTCAGATTtatgctctgctagagctgcccaggtcTATTATTGTATTGTGaagtgtattgtgtattgtattgtgaagtggaaacgtctaggagcaacaacggctcagccgcgaagtggtaggccgcacaagctcacagaacaagactgctg

Function

symbol description
impa1 Predicted to enable inositol monophosphate 1-phosphatase activity. Predicted to be involved in inositol metabolic process; inositol phosphate dephosphorylation; and signal transduction. Predicted to act upstream of or within phosphatidylinositol phosphate biosynthetic process. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability and intellectual disability. Orthologous to human IMPA1 (inositol monophosphatase 1).

NR:

description
inositol monophosphatase 1-like

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process

KEGG:

id description
K01092 E3.1.3.25, IMPA, suhB; myo-inositol-1(or 4)-monophosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935434.1 False 1611 mRNA 0.48 9 38199126 38217258
XM_036935432.1 False 1838 mRNA 0.47 9 38199258 38217258
XM_036935431.1 False 1607 mRNA 0.49 9 38202443 38217258
XM_021620816.2 False 1668 mRNA 0.47 9 38209398 38217258
XM_021620817.2 True 1666 mRNA 0.48 9 38209560 38217258

Neighbor

gene id symbol gene type direction distance location
LOC110535015 LOC106578726 coding upstream 153413 37866715 ~ 38045713 (+)
LOC110535665 LOC106578656 coding upstream 348700 37847147 ~ 37850426 (+)
LOC118937439 NA coding upstream 355619 37836986 ~ 37843507 (+)
lztfl1 LOC106590188 coding upstream 363786 37813177 ~ 37835340 (+)
LOC110535658 NA coding upstream 655936 37542062 ~ 37543202 (+)
LOC110535674 LOC106578734 coding downstream 134313 38351571 ~ 38497111 (+)
LOC110535673 enkur coding downstream 409003 38626261 ~ 38631703 (+)
LOC118937440 NA coding downstream 615904 38833162 ~ 38834976 (+)
LOC118937441 NA coding downstream 620909 38838167 ~ 38840060 (+)
LOC110535679 LOC106580199 coding downstream 734034 38951292 ~ 38954353 (+)
G974240 NA non-coding upstream 25403 38154323 ~ 38173723 (+)
G974229 NA non-coding upstream 55862 38143034 ~ 38143264 (+)
G974191 NA non-coding upstream 120763 38077812 ~ 38078363 (+)
G974187 NA non-coding upstream 125165 38073627 ~ 38073961 (+)
G975281 NA non-coding downstream 164012 38381270 ~ 38381481 (+)
G975293 NA non-coding downstream 172146 38389404 ~ 38389783 (+)
G975318 NA non-coding downstream 189922 38407180 ~ 38407393 (+)
G975319 NA non-coding downstream 190421 38407679 ~ 38408189 (+)
G975330 NA non-coding downstream 208144 38425402 ~ 38425634 (+)
G974184 NA other upstream 136026 38057798 ~ 38063100 (+)
G973918 NA other upstream 519758 37651138 ~ 37679368 (+)
G976017 NA other downstream 840418 39057676 ~ 39058011 (+)
G978255 NA other downstream 2550578 40767836 ~ 40768229 (+)
G978396 NA other downstream 2785818 41003076 ~ 41016088 (+)
G979689 NA other downstream 3861234 42078492 ~ 42078855 (+)
G979965 NA other downstream 4311262 42528520 ~ 42533308 (+)

Expression


Co-expression Network