LOC110535016


Basic Information

Item Value
gene id LOC110535016
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39626969 ~ 39633152 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110535016
ATGAGATTGACCAGGTCCTGTAtccataaagtgtctcagaATCTCCTCCATAGAGTTCACCTGAGAGGCTCCTTCATGGTCACTAGAGCTGCCTGGAACCACATGAAGTAAAGGATCGTTATGACATTATTGGCTGCTGGCATCTATGGCAATTTTGGGCAGGCGAACTACAGCGCGGCGAAGCTGGGACTGGCCAACACCCTGGCCATCGAGGGTCAAAAGCACAATATCCACTACAACACCATCACCCCGACCGCGGGCTCGTGCCTCAGAGACTGTTATGCCCCCAGATCTCTTGGAGTCCTTGAAAGCCGAATACATTTCCCCCTTGTTCTATGGCTGTCTCATGAGCAGTGTCAAGAAAATGGAGGCCTGTTGGAGGTTGGGGCTGGCTGGATTGGAAAATtgcgATAAGAGCGTTCCCAGGGCCACATCGTTGGGCACAAGAACCAAAGCATGTCTCCTGAGGCAGTGCGACACCAATGGGACAACATCTGTGACTTCACCAATGCCACCAAACCTGCCAACATCAGTGAGTCACTGGCCACGTTGGTGGAGGTGCGGTCAGGAACCGTCCCCAACTCCATCAGCGCTATTGTCGCCACTGCTGCATCCGGGATCAGTCCTATGGAGGCAGTGGGACAGAAGCTTCCAGAGTCATCCTTCAGCTACTCCCAAGCTCAGTGCATCCTGTATGACCTGGGAGTGGGCCTGTCCACCAAGGACGACGACCACCTCAAGTTCCTGTGTGAGGGCCACGAGGGCTTCAGCTGTCTGCCTACCTTCGGTGTCATCCCCTCCCAGGCAGCCATGATGTAGGGCTGGGCTCTGTGCCTAGACTCAACTTTGACCTCACGCAGTTGTTGCATGGAGAGCAGTAGCTGGAGCTTTTCCATTACCCACCTTGGGTCTGTCCCAATACAGATTCTAAGCTGCAGACGCAAGATGTGTTAGGCAAAGGATTTGGAGCAGTCATTCTCCTGGATGTCCACACGTACAGTGGGAAAGGGTTGGTGTTCTACAACCAGTACTCACTGTTTATCATGGGGGCTGGTGGATTTGGAGGAAAGAGAACATCTGATAAAGCAATGGCTCCCGAGCCAGGGCATATTGATGGGCATCCCTGGACTGCTGTGGGTGTAGGGGGTGGTGCCGTGGAGGGTGTTGATGTCGTCATGGAAGTCCTCACTTAtgccagagagagacaaagttTGAGAGGACGCTGCCAGACAGAGAACAGTATGAACACAGCGCTGACTGGAGCCAAGGGCTGGGACACGATGCCGTCTCACCATAGATTGTAA

Function

NR:

description
peroxisomal multifunctional enzyme type 2

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110535016 True 1304 mRNA 0.54 12 39626969 39633152

Neighbor

gene id symbol gene type direction distance location
LOC110535687 LOC106580186 coding upstream 106203 39482495 ~ 39520766 (+)
LOC110535681 mapkapk5 coding upstream 389953 39199736 ~ 39237016 (+)
LOC110535680 LOC106580198 coding upstream 622383 38989854 ~ 39004586 (+)
LOC110535679 LOC106580199 coding upstream 672616 38951292 ~ 38954353 (+)
LOC118937441 NA coding upstream 786909 38838167 ~ 38840060 (+)
LOC118937442 NA coding downstream 22479 39655631 ~ 39656997 (+)
LOC118937443 NA coding downstream 24458 39657610 ~ 39660250 (+)
LOC110535018 LOC106580184 coding downstream 61758 39694910 ~ 39787287 (+)
LOC110536621 NA coding downstream 203054 39836206 ~ 39837832 (+)
LOC110535689 LOC106580183 coding downstream 308438 39941590 ~ 39949172 (+)
G976383 NA non-coding upstream 17204 39609432 ~ 39609765 (+)
G976065 NA non-coding upstream 395532 39229675 ~ 39231437 (+)
G976062 NA non-coding upstream 399129 39227264 ~ 39227840 (+)
G976064 NA non-coding upstream 401120 39225256 ~ 39225849 (+)
G976066 NA non-coding upstream 402669 39223946 ~ 39224300 (+)
G976396 NA non-coding downstream 1216 39634368 ~ 39634602 (+)
G976714 NA non-coding downstream 33918 39667070 ~ 39667337 (+)
G976719 NA non-coding downstream 38277 39671429 ~ 39671635 (+)
G976722 NA non-coding downstream 41210 39674362 ~ 39674629 (+)
G976733 NA non-coding downstream 59711 39692863 ~ 39693126 (+)
G976017 NA other upstream 568958 39057676 ~ 39058011 (+)
G974184 NA other upstream 1563869 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1583639 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1791634 37813177 ~ 37835340 (+)
G973918 NA other upstream 1947601 37651138 ~ 37679368 (+)
G978255 NA other downstream 1134684 40767836 ~ 40768229 (+)
G978396 NA other downstream 1369924 41003076 ~ 41016088 (+)
G979689 NA other downstream 2445340 42078492 ~ 42078855 (+)
G979965 NA other downstream 2895368 42528520 ~ 42533308 (+)
G980019 NA other downstream 2998672 42631824 ~ 42636709 (+)

Expression


Co-expression Network