LOC118937443


Basic Information

Item Value
gene id LOC118937443
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39657610 ~ 39660250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034793.1
TCCTTTGTCTCGGATTCCTGTGGCCTTCCCACGGTCGAAGCCAACTCTCTGAGCCGCAGCTTGGTCATGTATGCCTGCAACAAGAATGTGGAACTGGCCATCCACTCCTCCTCGGTGCTCATCACCAACAGCCAGAGCAAGGCAGCCTCCAGCACCCTGATCCTCAGCATCTTCACCCCCAATGCGCTCATGATCGCCATGCACGCAAACGGCTCCCTGAACCAGTGGGCGGTCAGCTTCGCCTGCCTTCTCAACCGTTCTGCCTTCTCAACCGTTCTTAGCGTGTCGCACAAGTAGCGCTACTGCGGCCACTGCTTCCACCTCAACAACCTGGCCTGCCACTCCCTGTTGCCCCTGCTCCTCACCACCTCGCACCACAATGCCATGCGCACCCCCGACGTGGACAGTGTCATGGCCGCCCTCTCCCAGCCCATCAGGGGCAGGCCCTGCCGGGTGTCCCTGGGTGCCATGTCGAAGTACCCAAATGCCATTTACAGCAAGCTCATCCTGTGGAAGGTGGACCCTGGTGGAGCCCTTGTCCTTCTCTGGAGGGGTATCTGAGCTAGCCAGGAAAAACCTTCTCCACTCCTACGCCTTCTCCAACAGCCTGGCTGCCCACACTCATCCCTAGCAACTGCCTTGGTGTCTACTGCAACTCACCCAGTGCCTGCTTCGTGGCCAGTGATGGTCATTGAAGCCAAGAAACTACTCAATGAGCTCTACAACCCTGAGATATCAGGGAACGAGTCTTCTCCTGTCTGTCTTAAAGGCCTCCACATTTGGATTCATTTGGGGGAATGTTTCCGACAACCTTCAAGAAGCTGCTCTCCTCCTGACCATAGGGCACTTTGATCTGCCTCACAGGATACTCTAAAGATACTGAGATATGGAAACATTATTTAAATCTAATAAATTATCCTAATATAGAACAGGGACAGTCCATGATCTTTAAATCAGTAAAATAACCTTCAATAAGTCTGTTTAATCTCAAGACAGATTCACACCTAGCTTACTTACAAAGCAAGCACTGTCCTCATGCATATAGGGAAAATGTACCTATCCTGTTCAGCTGCAGGATGTTAGGGTCAGCGATGCTTCTCCCGGTTTGCCGCCTTTGGACTCCAGCAATATTCCATCTCCTGAAcgattgaaatctgacatgtgcAAACGTTATAAAAGTTACAATAATGACACTCAGCATAGTCGACGCCGCCCATACTCGCGCACCCCACGGTAACGTTAGCTGTTGcaatcattagctagctaacgttactaggTAGTTGTGCCGGTTAATGTTGACTTTTGTCAGGTATTACCTAACCTTCCAGAATTAATCCTACCTTTGAACCACCCGATCCTCCTGGGGTGGTTGTAAAGGTGGTTTCACTTCGCTGGCAAAATGTAAAAAGCAGTCATGTTTTCAAGGTTCGACATGACTTGGTCATTTGTTGGTGATGATGAATGAGAAGTTTTTCATATAGTGATTGGCCAACATTTGCATATAGTTTACATATTGTTATTTGatgtgtcaaatagtgttatttgacatgtatCTTTTTGACACACAAtgac

Function

NR:

description
dmX-like protein 1 isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034793.1 True 1572 mRNA 0.49 3 39657610 39660250

Neighbor

gene id symbol gene type direction distance location
LOC118937442 NA coding upstream 613 39655631 ~ 39656997 (+)
LOC110535016 NA coding upstream 24458 39626969 ~ 39633152 (+)
LOC110535687 LOC106580186 coding upstream 136844 39482495 ~ 39520766 (+)
LOC110535681 mapkapk5 coding upstream 420594 39199736 ~ 39237016 (+)
LOC110535680 LOC106580198 coding upstream 653024 38989854 ~ 39004586 (+)
LOC110535018 LOC106580184 coding downstream 34660 39694910 ~ 39787287 (+)
LOC110536621 NA coding downstream 175956 39836206 ~ 39837832 (+)
LOC110535689 LOC106580183 coding downstream 281340 39941590 ~ 39949172 (+)
LOC110535690 LOC106580180 coding downstream 320458 39980708 ~ 39982968 (+)
LOC110535691 LOC106580179 coding downstream 324335 39984585 ~ 39990217 (+)
G976396 NA non-coding upstream 23008 39634368 ~ 39634602 (+)
G976383 NA non-coding upstream 47845 39609432 ~ 39609765 (+)
G976065 NA non-coding upstream 426173 39229675 ~ 39231437 (+)
G976062 NA non-coding upstream 429770 39227264 ~ 39227840 (+)
G976064 NA non-coding upstream 431761 39225256 ~ 39225849 (+)
G976714 NA non-coding downstream 6820 39667070 ~ 39667337 (+)
G976719 NA non-coding downstream 11179 39671429 ~ 39671635 (+)
G976722 NA non-coding downstream 14112 39674362 ~ 39674629 (+)
G976733 NA non-coding downstream 32613 39692863 ~ 39693126 (+)
G976911 NA non-coding downstream 139430 39799680 ~ 39799892 (+)
G976017 NA other upstream 599599 39057676 ~ 39058011 (+)
G974184 NA other upstream 1594510 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1614280 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1822275 37813177 ~ 37835340 (+)
G973918 NA other upstream 1978242 37651138 ~ 37679368 (+)
G978255 NA other downstream 1107586 40767836 ~ 40768229 (+)
G978396 NA other downstream 1342826 41003076 ~ 41016088 (+)
G979689 NA other downstream 2418242 42078492 ~ 42078855 (+)
G979965 NA other downstream 2868270 42528520 ~ 42533308 (+)
G980019 NA other downstream 2971574 42631824 ~ 42636709 (+)

Expression


Co-expression Network