Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118937444 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 40942000 ~ 40943238 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034794.1 | True | 921 | mRNA | 0.48 | 2 | 40942000 | 40943238 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| arrdc3a | LOC106580165 | coding | upstream | 20574 | 40913124 ~ 40921426 (+) |
| LOC110535697 | LOC106580168 | coding | upstream | 65781 | 40845782 ~ 40876219 (+) |
| LOC110535696 | LOC106580169 | coding | upstream | 106691 | 40827054 ~ 40835309 (+) |
| LOC110535695 | LOC106580170 | coding | upstream | 126968 | 40787327 ~ 40815032 (+) |
| LOC118937351 | NA | coding | upstream | 140105 | 40798590 ~ 40801895 (+) |
| lysmd3 | LOC106580159 | coding | downstream | 228896 | 41172134 ~ 41176136 (+) |
| mblac2 | mblac2 | coding | downstream | 241862 | 41185100 ~ 41188623 (+) |
| LOC110535023 | nol6 | coding | downstream | 622954 | 41566192 ~ 41567177 (+) |
| LOC118936418 | NA | coding | downstream | 638489 | 41581727 ~ 41585824 (+) |
| LOC110535708 | LOC106580153 | coding | downstream | 652298 | 41595536 ~ 41604715 (+) |
| G978357 | NA | non-coding | upstream | 13867 | 40927928 ~ 40928133 (+) |
| G978350 | NA | non-coding | upstream | 30524 | 40911253 ~ 40911476 (+) |
| G978329 | NA | non-coding | upstream | 51898 | 40885708 ~ 40890102 (+) |
| G978324 | NA | non-coding | upstream | 65063 | 40876676 ~ 40876937 (+) |
| G978386 | NA | non-coding | downstream | 32185 | 40975423 ~ 40975839 (+) |
| G978387 | LOC106580163 | non-coding | downstream | 35510 | 40978748 ~ 41000277 (+) |
| G978479 | NA | non-coding | downstream | 163428 | 41106666 ~ 41106988 (+) |
| G978488 | NA | non-coding | downstream | 171142 | 41114380 ~ 41124123 (+) |
| G978586 | NA | non-coding | downstream | 317805 | 41261043 ~ 41261242 (+) |
| G978255 | NA | other | upstream | 173771 | 40767836 ~ 40768229 (+) |
| G976017 | NA | other | upstream | 1883989 | 39057676 ~ 39058011 (+) |
| G974184 | NA | other | upstream | 2878900 | 38057798 ~ 38063100 (+) |
| LOC110535015 | LOC106578726 | other | upstream | 2898670 | 37866715 ~ 38045713 (+) |
| lztfl1 | LOC106590188 | other | upstream | 3106665 | 37813177 ~ 37835340 (+) |
| G978396 | NA | other | downstream | 59838 | 41003076 ~ 41016088 (+) |
| G979689 | NA | other | downstream | 1135254 | 42078492 ~ 42078855 (+) |
| G979965 | NA | other | downstream | 1585282 | 42528520 ~ 42533308 (+) |
| G980019 | NA | other | downstream | 1688586 | 42631824 ~ 42636709 (+) |
| G981690 | NA | other | downstream | 2717136 | 43660374 ~ 43715297 (+) |
