LOC118936418


Basic Information

Item Value
gene id LOC118936418
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41581727 ~ 41585824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034630.1
tGGCTTGGCGTTCAGGATACAGGTAGCTTACCACCGGGAGCCACGTCCTGAGGGAGAGTGTGTCCAGAAGGACTCCTTATCATCAGGGACAACAAGGAGGCTCAAGCCCTGGAGATGGCAACCATACACCGGCCCCTACTCACCTGCATGGGCTCTAGCAACTCCACCCATACTTTGGGGCGGTGTGTCGCCTGCTCAAGCGCTGGCTGGGACCTCTTCAGTGATGACATAAGAGGACACTGCTGACCTGCTGGTGGCGTCCCTCTTCCTGCAGCCGTCCGCCTTCACTCCTCCAGGGTCTCCTCCTTCGCTTCCTCCACCTGCTCTCCTCCCTTCGACTGGAGAAACAACCCCCGGTGGTCAACCTCAACAACCAGCTCACcgGGGCTGACGACACTGAGATCAAGAATGACTTCATCTCCAGAGTTTCTGCCTGTCATGTTCGTTGCCACGCCCAAAGACAAGACGCTGTCAATCTGGACCAAATAGGCTCCATCTGGACAGGTTAGAACACGGACACACATCCAGTATAGTCACTAGTACAGTCATCCAATAGCATTGTACACAACAGCCCATTGTACACAACATAGTAACAGACTCAGACTTGAAAGAGAAGAAATAGAATACAAACTTGTATCAAATGATTGAACTGCGGTGTACTAACTCTCACACTGTCAAAGGccggcaaaaaaaataaaaaatcccgtCTGTGTATTGAGTAGTTTCGTCAAGGCTCTAAAGTGCGACCATTTTGGTCGCATATGCatctaaatattttgctgtgctaCCTACAATTGCAATTTTGGAGCACCAGTGCACCTACAAGAGAAATTACTCAGATAAGATTTTTTTCTAATAATTATACTTCACTCTACTGTTGTTTTCCAAGTGCCCTAGAGAAACGATTGAGTGAATATTCGTTAGCATCATGGTTGTACCATTTTTACAAtagcattttttaaaattgtttctAGCCCTAGCAGTCCAGAAGATATGACCCAAATTACCCGCACAACATTTTTTTCCTTCCTATAGCGGATTAGATGTCTGCGTTTTTACTTTCATAAACATGTCTCGGGCCATTCTTAAGCTACTCGTGGGCCATTCATTTACgccttgttcagtcatgttacctcattagctagctagctaacaaccggATAACTTTACCAGTATATTCAAACATTTGGGggcacagaaagaaagaaaaagggcTATATATTTTTCAGGAGATCAATGATCATAGTAATGAATGACGGATCTCTTGCATGTCATCACACACAAtgttcttaaagggatagttcacccaaattgcaAAATGAATCATTGGTTTCCTTATCCTAAAGTTTTAGCATTTCtggcacaaatcccatttaagtcatgggaccgatatgacattttttcGCGcgtcatgtccaaatcatccgaAAGTATCTCAAATCGAAGCTCAACAAAGTAACTAGTAGATGATTTGAACTTGTAACATGCTAGCATCATTCCTCTGACTttaatgggatttgtgccacgaATGCTAAAccgttagcatgtggaaacagtgccaggggaAACTGgatgctgtcataccttgtccaaag

Function

NR:

description
PREDICTED: nucleolar protein 6 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034630.1 True 1595 mRNA 0.44 4 41581727 41585824

Neighbor

gene id symbol gene type direction distance location
LOC110535023 nol6 coding upstream 14550 41566192 ~ 41567177 (+)
mblac2 mblac2 coding upstream 393104 41185100 ~ 41188623 (+)
lysmd3 LOC106580159 coding upstream 405591 41172134 ~ 41176136 (+)
LOC118937444 NA coding upstream 638489 40942000 ~ 40943238 (+)
arrdc3a LOC106580165 coding upstream 660301 40913124 ~ 40921426 (+)
LOC110535708 LOC106580153 coding downstream 9712 41595536 ~ 41604715 (+)
LOC118937352 NA coding downstream 40453 41626277 ~ 41632041 (+)
LOC118937445 NA coding downstream 83972 41669796 ~ 41699250 (+)
LOC118937354 NA coding downstream 129306 41715130 ~ 41760853 (+)
LOC110535709 LOC106580150 coding downstream 560176 42146000 ~ 42157026 (+)
G979204 NA non-coding upstream 4665 41570821 ~ 41577062 (+)
G979200 NA non-coding upstream 16534 41564785 ~ 41565193 (+)
G979198 NA non-coding upstream 19720 41561596 ~ 41562007 (+)
G979196 NA non-coding upstream 34844 41546616 ~ 41546883 (+)
G979193 NA non-coding upstream 38282 41543118 ~ 41543445 (+)
G979235 NA non-coding downstream 47413 41633237 ~ 41633469 (+)
G979247 NA non-coding downstream 63196 41649020 ~ 41702046 (+)
G979282 NA non-coding downstream 130924 41716748 ~ 41751955 (+)
G979460 NA non-coding downstream 223698 41809522 ~ 41809776 (+)
G979541 NA non-coding downstream 343855 41929679 ~ 41933856 (+)
G978396 NA other upstream 565639 41003076 ~ 41016088 (+)
G978255 NA other upstream 813498 40767836 ~ 40768229 (+)
G976017 NA other upstream 2523716 39057676 ~ 39058011 (+)
G974184 NA other upstream 3518627 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3538397 37866715 ~ 38045713 (+)
G979689 NA other downstream 492668 42078492 ~ 42078855 (+)
G979965 NA other downstream 942696 42528520 ~ 42533308 (+)
G980019 NA other downstream 1046000 42631824 ~ 42636709 (+)
G981690 NA other downstream 2074550 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2695101 44280925 ~ 44285969 (+)

Expression


Co-expression Network