LOC118937352


Basic Information

Item Value
gene id LOC118937352
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41626277 ~ 41632041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034631.1
ggagggtcaaaACCTTCCTTTGTATGATTTTGTTTTGTGCCACTTTTTTGATTTGCTTCCTATCTTTAAGCTTGATTCAATCTGCTGATGCCCAAAATGTCTGAGGTGTCCAGCCGGTAAAGGCCAGGAAATACTACAGTACTGCGATGGAGGCTGTTCTTATCCGCTTCTTTGGCTTCGTGCAtgacacactaacacacctgaGCAATCTGTCCGCCTGTCTCCAGAGGTCCACCATCACCATAGCAGAAGCCCACTGCTCCTTGTTCTCAACACAGACAGTACTTAAAGAAGTAAAAAAACAGAGAAGGGCCCATGATGAAGGCCACAATGGCCAACAGATATGAGGGGATTTCGCTGACCAGGTGACATCAAGACCCTCGTCACCTCACAGGACAAAATGCTTCACAGGCGAGTCGTGATTATGACTGACAGGTTCCAGGTCGCCAGTGTAGGGGTTCTGTGTGCCAACAAGCTGGTCAGCTTCACTAACTGGCCAGTGTCAGGAGATGAAGCAGCAGGTTACTTTATGTGTTGTATTAAAACCCCACCTGTTCCGTTTGGTTGTTATTGACTTTGTTAGTTTCCTCTTCTGTCTGAGTGCCATTTTTTGGTTTTCTTGCTGGGAATGTAACATTTCCCAACCCACCGTACTCAGTAGTGAAGAATGTCATTGAGGGGTCCTCAGAGTCCGTTGCGCTTTGAGACAGTTGAGAGGGCTCTGTCCCAGGGTCCATTTCAGTAGTGTTAGGGGCAGCCACACCATCCCCTGGAACTGGAGGGGGGAAACACGTCAGCATTAGAGAAGCAAGGCTCAAGCCACACTCACCTTAGAATACACCTCTCGTTGCCATCATTTGGCCGTATTTGAGAAGTGGATAATCTATTTGTCAACTATTTGTCATTTCACGATTGCTTTCAAAATAGAAACGGACAATATTCATACGATTACCGGTGTTTTATCTCTTAACACTCAAAAGTTGGTTTCTCCACTGACTGTTTGATAAGGGGAACCATGGGGTGTTAAAAACACTCGGAGACTAGCGTTTTGACTGTCAATGTGTTCAGCCTGAGACATGGCATGTAATTATCCTGACACTCACACCTCACCATTGCTACAGCCCAACCTTCCTTTGTCACAGACCCACTGAAaatatcctgaaaaactcctcagtccttatgTCTGACTGAAATGACACCCACTCTGCATTTAAGAGCATGCTGTGTTGgttgtgtctcaaccgatggcgGGCACAACTCAAACACCTCCATTATGCAAAATACGGCCTACACTACAACATATGCAAACATCTATATTACAATAGAAGTTTATGAATTGTTTGATAATTGATGTTAAATGATATAATAGTTTGACAacccctgtttgtaagcttttaaatgatatcaaacaCAACCTTTTATGTTTTCCCGTGATGATGACATGGAAAtctcatggtagggtggggtacGGAAAATGGGTCAACTCCTAAATGTCTTGGCATTAGGTCCAAAGAGCTACTTTTCTGTGGAAAGTATTAGGGCCAAGTGAAGAGAACAAATAAATAAAGAGTGATGGGTGGTAGTACTTTTTTTTCACATGGAttgtactttaaaaatatatattttgagaaTAAAGTTGAAGTACATTTGATTTAGGCTTGCCGT

Function

NR:

description
zinc finger protein 862-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034631.1 True 1665 mRNA 0.43 3 41626277 41632041

Neighbor

gene id symbol gene type direction distance location
LOC110535708 LOC106580153 coding upstream 21562 41595536 ~ 41604715 (+)
LOC118936418 NA coding upstream 40453 41581727 ~ 41585824 (+)
LOC110535023 nol6 coding upstream 59100 41566192 ~ 41567177 (+)
mblac2 mblac2 coding upstream 437654 41185100 ~ 41188623 (+)
lysmd3 LOC106580159 coding upstream 450141 41172134 ~ 41176136 (+)
LOC118937445 NA coding downstream 37755 41669796 ~ 41699250 (+)
LOC118937354 NA coding downstream 83089 41715130 ~ 41760853 (+)
LOC110535709 LOC106580150 coding downstream 513959 42146000 ~ 42157026 (+)
slf1 slf1 coding downstream 959967 42592008 ~ 42629731 (+)
fam81b fam81b coding downstream 1207507 42839548 ~ 42861443 (+)
G979204 NA non-coding upstream 49215 41570821 ~ 41577062 (+)
G979200 NA non-coding upstream 61084 41564785 ~ 41565193 (+)
G979198 NA non-coding upstream 64270 41561596 ~ 41562007 (+)
G979196 NA non-coding upstream 79394 41546616 ~ 41546883 (+)
G979193 NA non-coding upstream 82832 41543118 ~ 41543445 (+)
G979235 NA non-coding downstream 1196 41633237 ~ 41633469 (+)
G979247 NA non-coding downstream 16979 41649020 ~ 41702046 (+)
G979282 NA non-coding downstream 84707 41716748 ~ 41751955 (+)
G979460 NA non-coding downstream 177481 41809522 ~ 41809776 (+)
G979541 NA non-coding downstream 297638 41929679 ~ 41933856 (+)
G978396 NA other upstream 610189 41003076 ~ 41016088 (+)
G978255 NA other upstream 858048 40767836 ~ 40768229 (+)
G976017 NA other upstream 2568266 39057676 ~ 39058011 (+)
G974184 NA other upstream 3563177 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3582947 37866715 ~ 38045713 (+)
G979689 NA other downstream 446451 42078492 ~ 42078855 (+)
G979965 NA other downstream 896479 42528520 ~ 42533308 (+)
G980019 NA other downstream 999783 42631824 ~ 42636709 (+)
G981690 NA other downstream 2028333 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2648884 44280925 ~ 44285969 (+)

Expression


Co-expression Network