XLOC_028390


Basic Information

Item Value
gene id XLOC_028390
gene name NA
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 1014548 ~ 1015896 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055135
CCACAATCTCCTTCAgacagctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtctgcgtctgtgtctgtctgtctgtctgtctgtctgtctgtctttctttgtgtaactgtgtgtttgtgtgtgtgcacgggtgcgtgcgtgtgtgtatcaGCTCTTTACCCATCAGCCTTTAGAGTGAAGCGAGGGACACCTGCGTTCATCAACCCGTCCTTTCAGAAAACTGTGGAAGAAGCCGGCCTTCTCTATGAGGTGTTGTTGTCTGGCGGCTTCATGGACGCGATGCATGGGACGCTGCATGTGCCGGATGCAGAGCTGTCTTCCCTGCGGCGGCTGCAGGTTCTGGAGGTCCTGTGTGAGGATGTTCTTCCCAGAAGCCTCTCTGAGATCTTGCGGGTCAGTGCGGGTCTGGAGCAGCAGCGCGGGACTCTGCGTCTGGAGGACTTCGAGCGAACTGTCCTGACACTGGTGTTCACTGCGCAGCAGATCCAGCAGAAGCAAAGTACAGCACAGAGAGAGATCTGGAGGAACACACTCATCAGACTTTATCAGGCCATTAAAGCAgacctgcagcacacacacagataa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

Ensembl:

ensembl_id ENSDARG00000103102

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055135 True 675 mRNA 0.56 2 1014548 1015896

Neighbor

gene id symbol gene type direction distance location
XLOC_028389 NA coding downstream 1453 1010960 ~ 1013095 (-)
XLOC_028388 naga coding downstream 22400 982028 ~ 992148 (-)
XLOC_028387 atp23 coding downstream 49281 958051 ~ 965267 (-)
XLOC_028386 sim1b coding downstream 65706 929557 ~ 948842 (-)
XLOC_028385 NA coding downstream 92787 919752 ~ 921761 (-)
XLOC_028391 NA coding upstream 6420 1022316 ~ 1023700 (-)
XLOC_028392 NA coding upstream 12940 1028836 ~ 1036046 (-)
XLOC_028393 NA coding upstream 38765 1054661 ~ 1259741 (-)
XLOC_028394 NA coding upstream 207268 1223164 ~ 1234236 (-)
XLOC_028395 ptn coding upstream 285540 1301436 ~ 1360495 (-)
XLOC_028383 NA non-coding downstream 110526 899962 ~ 904022 (-)
XLOC_028375 CU855889.2 non-coding downstream 280201 701612 ~ 734347 (-)
XLOC_028376 NA non-coding downstream 282064 723830 ~ 732484 (-)
XLOC_028406 NA non-coding upstream 832764 1848660 ~ 1855771 (-)

Expression


Co-expression Network