LOC118937445


Basic Information

Item Value
gene id LOC118937445
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41669796 ~ 41699250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034795.1
gggtgtgtgtgtgtttattctctGCGAGTAAAGAAGGAAAGGCATTTAGAAACGGAGGAAAAGTGTACAGTTTGGGTCTATGGGACAATGGACCCAGTTAATCTTATATCAGTAATAGTTAAGGTTTACAACATTCTGCTGGTAAATGTTGCTAAATAGCAGCCTATTCCATTTGTAAAGGACAACTTTACCTGATAGGTCAGCTGGATCGCCCGGCCCCGGGTGCCTCGGCTCCGAAAATGAGAAGCCCCGCTCGGCTCCCCTGCCGGCGACCGGGAGCAACCCTTGCCCGCGCCCGCCCGATGATTAATGCCACCCCCGTCCAGCCACAAACCTTTCTGCCGCAGATAATGCCAGGCAGCAAGCACGCCTGACACTTTTAATGTATAATTAAGTAGAAAAAGTCAGCACTGGCTATGcaaatttttttaaatgataaatgACGCTGCACAGCAGCAGGGATTGATTTGGTGTAAATGAAACTAATTAAGGAAATGTCAAACATAATTAATAAAACAGGTTTAAGCTGCAAAACATTGTCAATTGAATGAATGAGGAGGCATTGGCTCCCATTGTTCCGGCTTTATTTAGGGCTTGTGTTTAGCTTGTTCTCTGCTCCAGAATGCACTCTCCCCACCTCACACCCTCCACCACCAATTCCCTGAGAGGGGGAAAATAAATGTGCTTGTCTCTCCGCTGACTGTAGAAATTAATTGCTGAAATCTTGTCCCATCCAAGTGTTACATTCACTCGCAGGACATTAACATAACTAATTTGAAAGAGCCCAAATGACTGCATAATGGAGCTCCGTCAGCACGCATGACAGTCGCTGGTCATACCAAATTAGCTCGGTTTTATAATTGAAATTTTTCCCCTGTTCCAATTTTTATACAATTTTCCCCCACCCattttttccctccctcctccatgctATCTTTCCTCTTCTTCTCGATAAGAACAAAGGTTTTATAATTTACAAAAAGAGTGCTTGACCTATAATTAGAGGGAAGAGTGTAGGGGAGGGGCTGCTGGAGGAGTCCCATCCTTAGTCCTGGTAATGATGCTGGAGACCTTGTAGCCTCCTGGGAGCCCTGAGAATAATGGGATGGGCTATTTTTATGGAGGACCAGAGCAGTGTGCCCCCGCTGGGGCGCTGAAGCCCTGGTGTGGTGTGGCGCAGCGGGGGCTAGCGGGGGCCAGCTCTCAGCCTGCCAGCCACAACCCTGCCCATCAGTTCCACCCATCAGCCCAGCCTGCCCCGTCAGCCCTGTGCCCCATGCCATCCGCTGCTCCTGCCCTTGCCgcggagagaggggatgggggaaCATCTGCCGCTCTCCCTCCCCGCACAGAGAACTCActgagagagaagtagaggggaGTCTTACTTTCACATGCACAGTCACAGGCGTGTACAGACACTCAATAATATTGTGTTCATTCTCACTCGTGTGTTCTTTTTTTCATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034795.1 True 1469 mRNA 0.48 3 41669796 41699250

Neighbor

gene id symbol gene type direction distance location
LOC118937352 NA coding upstream 37755 41626277 ~ 41632041 (+)
LOC110535708 LOC106580153 coding upstream 65081 41595536 ~ 41604715 (+)
LOC118936418 NA coding upstream 83972 41581727 ~ 41585824 (+)
LOC110535023 nol6 coding upstream 102619 41566192 ~ 41567177 (+)
mblac2 mblac2 coding upstream 481173 41185100 ~ 41188623 (+)
LOC118937354 NA coding downstream 15880 41715130 ~ 41760853 (+)
LOC110535709 LOC106580150 coding downstream 446750 42146000 ~ 42157026 (+)
slf1 slf1 coding downstream 892758 42592008 ~ 42629731 (+)
fam81b fam81b coding downstream 1140298 42839548 ~ 42861443 (+)
LOC110535025 LOC106580143 coding downstream 1458382 43157632 ~ 43208004 (+)
G979235 NA non-coding upstream 36327 41633237 ~ 41633469 (+)
G979204 NA non-coding upstream 92734 41570821 ~ 41577062 (+)
G979200 NA non-coding upstream 104603 41564785 ~ 41565193 (+)
G979198 NA non-coding upstream 107789 41561596 ~ 41562007 (+)
G979196 NA non-coding upstream 122913 41546616 ~ 41546883 (+)
G979282 NA non-coding downstream 17498 41716748 ~ 41751955 (+)
G979460 NA non-coding downstream 110272 41809522 ~ 41809776 (+)
G979541 NA non-coding downstream 230429 41929679 ~ 41933856 (+)
G979544 NA non-coding downstream 241416 41940666 ~ 41969077 (+)
G979620 NA non-coding downstream 315277 42014527 ~ 42014753 (+)
G978396 NA other upstream 653708 41003076 ~ 41016088 (+)
G978255 NA other upstream 901567 40767836 ~ 40768229 (+)
G976017 NA other upstream 2611785 39057676 ~ 39058011 (+)
G974184 NA other upstream 3606696 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3626466 37866715 ~ 38045713 (+)
G979689 NA other downstream 379242 42078492 ~ 42078855 (+)
G979965 NA other downstream 829270 42528520 ~ 42533308 (+)
G980019 NA other downstream 932574 42631824 ~ 42636709 (+)
G981690 NA other downstream 1961124 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2581675 44280925 ~ 44285969 (+)

Expression


Co-expression Network