LOC118937353


Basic Information

Item Value
gene id LOC118937353
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41712605 ~ 41715025 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935487.1
TGCGCCAGCGGAGGCGTCTCCCTGCCATTTGGCATGCCATGCGCGTCTGGTGCGCTGGAGACTGCCTGTCAAATGCCTATGAGTCCATAGAGCAGCCAGAGACCCTACGGAGCGCCAGATGGGCCATTAAGGCCTCTACACTCCTCCCACCCCAGCCCAGGGGTGGATCCAGGCCTCTACACTCCTCCCACCCCAGCCCAGGGGGTGGATCCAGACCTCTACACTCCTCCCACCCCAGCCCAGGAGGTGGATCCAGGCCTCTACACTCCTCCCACCCCAGCCCAGGGGGTGGATCCAGGCCTCTACACTCCTCCCACCCCAGCCCAGGGGGTGGATCCAGGCCTCTACACTCCTCCCATCCCAGCCCAGGGGGTGGATCCAGAGCCAGGCTCATGTTCAGTCCAAGTCACAGGCTGTGTACTAAAGGCTCCGACGCCAGGTCTCTTGAGGCAGCTCACATGAAAACGACAGTACCGGCACACCGGTGGTCAGTGTTCGAATCAAACGCACTGTTAGCGGAGCGCGGCAAGCGCTTCTGCTACCCACACCCGTTAGGGTACGTCTGAAATGAAGCTGACATCTTTTCCCAAGGCTGCTCTTGACAAGGAATTTCCTCCTTCAAGTATTGCCCATCCTCTCCACACAAGCACGTGAAACACAAGTCGTTAGGTTTAGATCATTTACAATCAAGCCAAAAGTGATGATGAAATACTACTGGAAAACCAGATAGAAATGAAAtataataaatgtaataaaaatggAAGTTAATCTTTATGAGCATACTGTATCTGGCAACAGGGTGTACAAATTGAGCAGCCAGCTGTCAATCCACTCCCATACCCCCATCAGAGTCAATCCAATTTAAAAATCCTCTTCAACTAGTCACAAAACAACCTCAACTGACAATGCAAACCAATTTCATCATAATTGATTGAGAGGAGCAAATGCTATTTTGGCATTTACGTTCACTGAACGGGCCAGCTTTTAATAAAGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106594294, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935487.1 True 994 mRNA 0.52 2 41712605 41715025
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110535706 LOC106580155 coding downstream 191518 41423356 ~ 41521087 (-)
LOC110535705 LOC106580156 coding downstream 317383 41330856 ~ 41395222 (-)
LOC110535704 LOC106580157 coding downstream 386016 41321307 ~ 41326589 (-)
LOC110535022 LOC106580158 coding downstream 399163 41194042 ~ 41313442 (-)
polr3g LOC106580161 coding downstream 526864 41176002 ~ 41185741 (-)
LOC110535710 NA coding upstream 424376 42139401 ~ 42149296 (-)
LOC110535712 LOC106580148 coding upstream 464360 42179385 ~ 42425315 (-)
kiaa0825 kiaa0825 coding upstream 710450 42425475 ~ 42591782 (-)
LOC110535714 LOC106580145 coding upstream 916797 42631822 ~ 42836577 (-)
LOC110535024 NA coding upstream 1194265 42909290 ~ 42916107 (-)
G979345 NA non-coding downstream 106262 41605784 ~ 41606343 (-)
G979326 NA non-coding downstream 142004 41570355 ~ 41570601 (-)
G979323 NA non-coding downstream 147542 41564816 ~ 41565063 (-)
G979318 NA non-coding downstream 170135 41542243 ~ 41542470 (-)
G979184 NA non-coding downstream 178959 41533377 ~ 41533646 (-)
G979482 NA non-coding upstream 131371 41846396 ~ 41846595 (-)
G979502 NA non-coding upstream 153895 41868920 ~ 41869238 (-)
G979593 NA non-coding upstream 202484 41917509 ~ 41918599 (-)
G979595 NA non-coding upstream 214778 41929803 ~ 41940442 (-)
G979596 NA non-coding upstream 214983 41930008 ~ 41934780 (-)
G979041 NA other downstream 439178 41273089 ~ 41273427 (-)
G975110 NA other downstream 3634078 38077851 ~ 38078527 (-)
G975103 LOC106578726 other downstream 3667694 38041406 ~ 38045662 (-)
LOC110535661 LOC106578659 other downstream 3967179 37735411 ~ 37809752 (-)
G974756 NA other downstream 4296970 37414378 ~ 37415635 (-)
G980514 NA other upstream 758785 42473810 ~ 42563730 (-)
G982818 LOC106613263 other upstream 2894384 44609409 ~ 44609942 (-)
G983486 NA other upstream 3384463 45099488 ~ 45100219 (-)

Expression

LOC118937353 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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LOC118937353 Expression in each Bioproject

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LOC118937353 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3.
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Co-expression Network