LOC118937354


Basic Information

Item Value
gene id LOC118937354
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41715130 ~ 41760853 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034632.1
tcatctctctctccctctctctctctctctccctctctctccctccctctctctatctcagtttcTCTGTTCGTCCTCCTTGTCTTCTCacactccctgtccctccctcttccccaccTTCTCGGTTCATCCCATTTGCTACTGGATGCTAAATTGCGGTGCCTAGATGAAAGGACAATGAGAAAGGCAGGTTAAGTCGGGCTAACACAGACCAGATCCACACAGGTGCTGCAGACTGACAGAGGACACCACACCGATGGAACAAAATGTTACACAAGTTGTTGCATTAAGAGAGCCTCTGTAAAAAAAAGCCTGGCGGTGGGCGAGGGAGGACTCTGATGACGGTGAGCTGTGTTGTCAGTGCTCCACAGCCTAGCAGGGCCTAGCGGGGCCAAAGAGCAGTGTGCCGGGGAGGGAGGGGAGTCCAAGGCAGGGCTATTACATCACCCCTATCAGGGCTGATTGGGCTGAGGGTCTGTGCATGCGAGCGGGGCCCGCTCACTGGCCCATATGCCTTTAATACAGGACCAGATGTGGAGCTAACCCAACGCCCCAGCCAGTTCCACCGCCCCGCCCCCTGCTCCTCAATGCTCTAAGCCAGCCGTAGCATCCCGGGTCATGCTTAGTAAAAAAAGGTTTCATGGGAGCTAACTGGCATCCTCATATGATTGGGTGGAGATGATTTGTATTTCAGATGGCCTCCCCTcaggattgtgtgtgtttgtctgtctgtctgtctgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034632.1 True 741 mRNA 0.54 3 41715130 41760853

Neighbor

gene id symbol gene type direction distance location
LOC118937445 NA coding upstream 15880 41669796 ~ 41699250 (+)
LOC118937352 NA coding upstream 83089 41626277 ~ 41632041 (+)
LOC110535708 LOC106580153 coding upstream 110415 41595536 ~ 41604715 (+)
LOC118936418 NA coding upstream 129306 41581727 ~ 41585824 (+)
LOC110535023 nol6 coding upstream 147953 41566192 ~ 41567177 (+)
LOC110535709 LOC106580150 coding downstream 385147 42146000 ~ 42157026 (+)
slf1 slf1 coding downstream 831155 42592008 ~ 42629731 (+)
fam81b fam81b coding downstream 1078695 42839548 ~ 42861443 (+)
LOC110535025 LOC106580143 coding downstream 1396779 43157632 ~ 43208004 (+)
LOC110535720 NA coding downstream 2269685 44030538 ~ 44054846 (+)
G979247 NA non-coding upstream 13084 41649020 ~ 41702046 (+)
G979235 NA non-coding upstream 81661 41633237 ~ 41633469 (+)
G979204 NA non-coding upstream 138068 41570821 ~ 41577062 (+)
G979200 NA non-coding upstream 149937 41564785 ~ 41565193 (+)
G979198 NA non-coding upstream 153123 41561596 ~ 41562007 (+)
G979460 NA non-coding downstream 48669 41809522 ~ 41809776 (+)
G979541 NA non-coding downstream 168826 41929679 ~ 41933856 (+)
G979544 NA non-coding downstream 179813 41940666 ~ 41969077 (+)
G979620 NA non-coding downstream 253674 42014527 ~ 42014753 (+)
G979623 NA non-coding downstream 261832 42022685 ~ 42022911 (+)
G978396 NA other upstream 699042 41003076 ~ 41016088 (+)
G978255 NA other upstream 946901 40767836 ~ 40768229 (+)
G976017 NA other upstream 2657119 39057676 ~ 39058011 (+)
G974184 NA other upstream 3652030 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3671800 37866715 ~ 38045713 (+)
G979689 NA other downstream 317639 42078492 ~ 42078855 (+)
G979965 NA other downstream 767667 42528520 ~ 42533308 (+)
G980019 NA other downstream 870971 42631824 ~ 42636709 (+)
G981690 NA other downstream 1899521 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2520072 44280925 ~ 44285969 (+)

Expression


Co-expression Network