Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110535714 |
| gene name | LOC106580145 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 42631822 ~ 42836577 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036935498.1 | False | 7911 | mRNA | 0.50 | 22 | 42631822 | 42836577 |
| XM_036935499.1 | False | 7908 | mRNA | 0.50 | 22 | 42631822 | 42836577 |
| XM_036935500.1 | False | 7872 | mRNA | 0.50 | 21 | 42631822 | 42836577 |
| XM_036935501.1 | False | 7809 | mRNA | 0.49 | 21 | 42631822 | 42836577 |
| XM_036935502.1 | False | 7806 | mRNA | 0.49 | 21 | 42631822 | 42836577 |
| TU1116448 | False | 1589 | TUCP | 0.50 | 2 | 42634144 | 42636062 |
| TU1116450 | False | 1534 | TUCP | 0.50 | 2 | 42634144 | 42636062 |
| TU1116454 | False | 1644 | TUCP | 0.50 | 2 | 42634144 | 42636062 |
| TU1116456 | True | 1754 | TUCP | 0.50 | 2 | 42634144 | 42636062 |
42,640,000
42,660,000
42,680,000
42,700,000
42,720,000
42,740,000
42,760,000
42,780,000
42,800,000
42,820,000
42,840,000
42,860,000
42,880,000
42,900,000
42,920,000
42,940,000
42,960,000
42,980,000
43,000,000
43,020,000
43,040,000
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kiaa0825 | kiaa0825 | coding | downstream | 40040 | 42425475 ~ 42591782 (-) |
| LOC110535712 | LOC106580148 | coding | downstream | 206507 | 42179385 ~ 42425315 (-) |
| LOC110535710 | NA | coding | downstream | 482526 | 42139401 ~ 42149296 (-) |
| LOC118937353 | NA | coding | downstream | 916797 | 41712605 ~ 41715025 (-) |
| LOC110535706 | LOC106580155 | coding | downstream | 1110735 | 41423356 ~ 41521087 (-) |
| LOC110535024 | NA | coding | upstream | 72713 | 42909290 ~ 42916107 (-) |
| LOC118937355 | LOC106580271 | coding | upstream | 86597 | 42923174 ~ 42925634 (-) |
| LOC110535716 | LOC106580271 | coding | upstream | 101567 | 42938144 ~ 42958341 (-) |
| LOC110535717 | LOC106580142 | coding | upstream | 390301 | 43226878 ~ 43242918 (-) |
| edil3a | LOC106580141 | coding | upstream | 546636 | 43383213 ~ 43630942 (-) |
| G980571 | NA | non-coding | downstream | 63265 | 42568325 ~ 42568557 (-) |
| G980570 | NA | non-coding | downstream | 63691 | 42567867 ~ 42568131 (-) |
| G980569 | NA | non-coding | downstream | 64282 | 42567313 ~ 42567540 (-) |
| G980568 | NA | non-coding | downstream | 64551 | 42566916 ~ 42567271 (-) |
| G980566 | NA | non-coding | downstream | 67461 | 42564055 ~ 42564361 (-) |
| G980767 | NA | non-coding | upstream | 26858 | 42863435 ~ 42864216 (-) |
| G980769 | NA | non-coding | upstream | 29573 | 42866150 ~ 42866384 (-) |
| G980780 | NA | non-coding | upstream | 41141 | 42877718 ~ 42877948 (-) |
| G980740 | NA | non-coding | upstream | 55924 | 42892501 ~ 42893774 (-) |
| G980738 | NA | non-coding | upstream | 71860 | 42908437 ~ 42909019 (-) |
| G980514 | NA | other | downstream | 68092 | 42473810 ~ 42563730 (-) |
| G979041 | NA | other | downstream | 1358395 | 41273089 ~ 41273427 (-) |
| G975110 | NA | other | downstream | 4553295 | 38077851 ~ 38078527 (-) |
| G975103 | LOC106578726 | other | downstream | 4586911 | 38041406 ~ 38045662 (-) |
| G982818 | LOC106613263 | other | upstream | 1772832 | 44609409 ~ 44609942 (-) |
| G983486 | NA | other | upstream | 2262911 | 45099488 ~ 45100219 (-) |
| G984166 | LOC106580127 | other | upstream | 2769147 | 45605724 ~ 45606417 (-) |
| LOC110535758 | foxn4 | other | upstream | 3366132 | 46202709 ~ 46223082 (-) |
| G985191 | fam222a | other | upstream | 3702956 | 46539533 ~ 46541987 (-) |
| G980635 | NA | non-coding | upstream | 27409 | 42663471 ~ 42663921 (-) |
| G980741 | NA | non-coding | upstream | 172875 | 42808937 ~ 42809299 (-) |
