fam81b (fam81b)


Basic Information

Item Value
gene id fam81b
gene name fam81b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 42839548 ~ 42861443 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021620910.2
aaaacaaacacattatGCACAACACACTGTAGACCAGACATTGGTTTGGAATCAGAAAACTGTTATGAAGAGGAATCATGTCACAGCCGTACGAGCCTTATGACAAGTCTGATGTCATAGAAGGCCGTCTGACCAATCAGGAGCGTACGATGAGCGTGCTGCTTGAGCAGGCGTTCAGGATCAAGGAGGAGGTGGTGGCCAGTCTGCACTTCACCCAGGGCTCTGTCCAGTCAGAGACCTCCTCTCGCAGGCTGCTGGAGAGCCACATCCACACCATCACGCACATCGTCAAACAGCTCAGCACTGACATACAGGTTCTGAAGAGTCAGATAGCCCAGCGGGACAGTGTCACCTCTGGGACCTCTTTTGCTATGCAGAGTCTGGATCACAAAAACCTGGCTGGTTTTGGTGACCTCAGGGGCAGGGTGGCCAGgTGTGATGCCAGCATTGCCAAGCTGTCAGGTGATGTGAGCGACAGGGCACAAGAGATCGCCAGGCTCCAACAGGAGGTGTCAGAGGTCAAGTCAGGTCTGGGAGAGCGACTGAGAGAGATAGACATCAAGctgtcTCAGGCAGTTAGCAGACTGGAGGTGTTGCTGGTGGACCAGACCCACGGCCAGAGAAACAGCTGGACTGACCTGCACAGCCAAATCAAGCTCCTGGAGGCCAAGAGCTCTGGTGTGGTAAGGGAGGCGAgggaggacacagacagactcagGATGTGGACAGAGCAACAGCTAAGCAGctcagcacagacacacagacatggcaGTGAGGTGCTACGGTCTCTACTGCAGGACAAAATGgTGGAGGCAGATGGGAGGCTCAGTGAGCAGGTCAGGCTGCTGTCAGTCCGTGTGGAGAGAGCAGAGATTCAGCTGGAACAGGAGCACCAGGCAGACAGGGTAAAGCACTCGAAGAGGAAACTCCACAGTAGGATCAGCACATTGGAGACCAGCTTCCGGGAAGAGCTGCAGCTGATCAAACAGGACTACCAGTCAGGGTTCCAGTCTATCCATGATGCCATAGACTCGCTGAGGCAGATCGGTGACACCAAAGCCCGGCTGGACAAGGAGAAGCTGCAAAAGGACATCAAACAAATCCGCAGGAAGATGGTGGAGCTGAGAGATGTGTGACGCCACAGGTCACACAGGAGTGTGGTACTGCATGGTGAAACAGACCAGTAATGAAATTTCATACTCAAAATTGTCAATAATTGTGAATGACACAGAAGTCCATGATTACTGGGATCCACATGGTATATTAAAGTGTGCAATAGATCAGGAATTATTATGGGATGCTTTCACTTTGAAACCTTTTCAAATCACTGATTTAATACCAAAAATAGTTAATCAGAAGAAAATCTTTGTTATTATATCTCATCTGAAATGAATAAAGTTCATCATGAAAGTACAATTTAGTAATATTGACACAATCAAGCATGAGAATTTATTTCCAAATGCACCTGTCATCTCAAAATGCCAGAATGTATTGTTCAGGTACTGTGTCAAGAGCTGAAGGGTATAGTATTTCATATTATTACAGCACTATATTTCAGCAAAATGCATCTCACTTCCAGCTCCTATGTCAAGGAAAAAACATTTGACTGTTGAGATGAAGCCAAACGTCTGCTCTTTCTAGTTGTTACAGTTGCCCAGTTGCTACAATCTATTGTTATCTACGAATTGTCTCTGGAAATCGCCTGCACAAATGTCTAGCCTGCTCCAGTTGTAAATGCAACTTGTTCAGGTTTCCACTGTACATCCTGAAATGCAAGATACACAGCAGTGCTGTGCAAAAGTATTTCCCCCTTTTCAAATgttctctacttttgcatatttttaaTACTGAATATtctcaga

Function

symbol description
fam81b Orthologous to human FAM81B (family with sequence similarity 81 member B).

NR:

description
protein FAM81B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021620910.2 True 1862 mRNA 0.47 9 42839548 42861443

Neighbor

gene id symbol gene type direction distance location
slf1 slf1 coding upstream 209817 42592008 ~ 42629731 (+)
LOC110535709 LOC106580150 coding upstream 682522 42146000 ~ 42157026 (+)
LOC118937354 NA coding upstream 1078695 41715130 ~ 41760853 (+)
LOC118937445 NA coding upstream 1140298 41669796 ~ 41699250 (+)
LOC118937352 NA coding upstream 1207507 41626277 ~ 41632041 (+)
LOC110535025 LOC106580143 coding downstream 296189 43157632 ~ 43208004 (+)
LOC110535720 NA coding downstream 1169095 44030538 ~ 44054846 (+)
LOC110535722 LOC106580138 coding downstream 1258038 44119481 ~ 44178070 (+)
LOC110535730 LOC106580238 coding downstream 1993059 44854502 ~ 44865316 (+)
LOC110536623 NA coding downstream 2028286 44889729 ~ 44895936 (+)
G980072 NA non-coding upstream 135699 42703568 ~ 42703849 (+)
G980019 NA non-coding upstream 202839 42631824 ~ 42636709 (+)
G979987 NA non-coding upstream 270194 42569102 ~ 42569354 (+)
G979985 NA non-coding upstream 273086 42566245 ~ 42566462 (+)
G979984 NA non-coding upstream 273306 42565817 ~ 42566242 (+)
G980171 NA non-coding downstream 4692 42866135 ~ 42866460 (+)
G980175 NA non-coding downstream 9354 42870797 ~ 42871073 (+)
G980191 NA non-coding downstream 26845 42888288 ~ 42888488 (+)
G980194 NA non-coding downstream 27781 42889224 ~ 42889433 (+)
G980204 NA non-coding downstream 55328 42916771 ~ 42928679 (+)
G979965 NA other upstream 306240 42528520 ~ 42533308 (+)
G979689 NA other upstream 760693 42078492 ~ 42078855 (+)
G978396 NA other upstream 1823460 41003076 ~ 41016088 (+)
G978255 NA other upstream 2071319 40767836 ~ 40768229 (+)
G981690 NA other downstream 798931 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 1419482 44280925 ~ 44285969 (+)
LOC110535735 fibcd1 other downstream 2521964 45189846 ~ 45413082 (+)
G984422 pesc other downstream 3246477 46107920 ~ 46109940 (+)
G985257 NA other downstream 3745949 46607392 ~ 46607681 (+)

Expression


Co-expression Network