LOC110535750 (LOC105014428)


Basic Information

Item Value
gene id LOC110535750
gene name LOC105014428
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 46031189 ~ 46067844 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110535750
AGAACACTTTTTGAAGAAAAACATTTATACAGTTGAActactagctctctctttctcctgccgTGTACTGTGTCTACCCGTCCCGGACCCGAAACATAATAGTAGAGAAGAGACTGACTTGATTCTAGCACAATGTATCTCTTGCTCACCAGCTGCCAGTAGTGTGCAACCAACATTGCCTTTAGCCCAAAGGGAGATACAGAACCCAAGTGCCCAAAAccctgttttagcatgggcagagCCATTGAGGACGCATCATTTTCAAGTAGTCAACTGGATGGGTCTTCTTATGGGTTACGGTTCACATGATTCTATCCAGGTCATTAGCCAATTAATTAGACTCATGAGCAAACgttccataactgcaggtggcagtacaTTGCCAACCCaggctttatacctgttcaaacaacacactccaggtggcagtatgcaccaTTCCAGTTGGTTTACCAACTCATAGAGGTAGTAGAAGAAAATAGACTACTTCAAAAttgagatggcctcaatggcgctgcccgtgCGCTCACAGACATATTGCGCCCTCTAACCGTCGCTATGCTTTAGCTGTTGGGCTGCAGCAAGCTGGCATTTAGAAATTTGAAATATTAGACTTTTTGAAATCAAACAGATATTGAATCAGGGGACCACTTGAGGGCAATGGAGCACATCAAAGCTGAAGGAGACCTTCAAGTCTGCGCAGGTTAACCCTTGACCTTTGTCTAAACAAATTACCAGTGTATTCCAGTAGTGTCAGGTTCCAATGATATGTGGAAGATAAGCTTGCACCCCCAAAAACTGTATGACATACTAAATTATATTTTGATATTTCTGTATACCGGTAGTCGATCTTACCTAAGGTTGCGAAGGGAGGGtatatcacatgtaaaatatattgaATAAGATGATTATAAAATGACAAAACATTATCCTCAATATAAACCAACTTAGAGAATACCATTAGTGTTtcatatgagggtttcagcatgaaatatgtCATTTTTTTTACAAACTATGTCAATATGTTTAATGTTTTGGCGTCAAactgggaaagggggatacctagtcagttgtttcaactgaatgccttcaactgaattAGATAGGtgtgggggggctgccttaatcgacatccacctTGACATCCAcctcttcggcgcccggggaacagtgggttaaactgccttgctcaggggcagaacgacagattttttccttgttagctcggggatttgatccagcaaccttttggtggTGGCAGTTGGGAAAAAAGgcaatagttggaagagttggagttaattgaaaataatgccattgttgatttctttaattaggctattttctcttgaaccatatggtctatttcaggggtgtcaaacttattccacggagggccgagtgtctgcaggtttttgttttttcctttcactTAAGACCTAGACAAACAGGTgaagggagttccttactaattagtcaTCTTAATTCATTAATCGAGTACAAGGATGGAGTGAAATCCCACAGACACTtagccctctgtggaatgagtttgacatgtggtctttctactagaaactcatggacacaTTAAATGAATACTaaatatgaatacatttttaaaaagttaaGTGTAAATTACCAAAATTATGATAGATTGCCATAGACTTTCTGATAATTACTGAAGATTCtggtaaattaccggtagctttgcaacctTAACCTTACCATTCATTTTGGATTTTTGGATCTGCGTATAGCTGGGTCTACAAAACATGGCCTAGGATGTGGACTGATTTTGACAAAAGGCCACTTTTGAGATCTGAAAACATCTGATAAACTTTGATTGGAGTTTAATATCCGTTTTAAGGCTGTGTTGATTTTCTGTGGAATGTGACTCCTTTTCATCTGTTCCCAATTGATTTCAtgtaacatttaaaataaaacgCTTTCCCTAAGGTCGATGAATGAAAGAGTCGAGGGCTTAGTGGCCAGATAGGATTTCATGTTCCCTGCCAGCTACAAACCCAGAGCTCTAAAACATAAATGAGGACCTCACCAAGTGTTGGGCTCTTGTTCAGCCTAAGTAGTATTGCTTTGAGCACGAGGTGCTATTAATAGTCTTGACACTTGAGACGTTTTGGCAAATCAACTGATTTTCTCTAGATGAAAAAAAACTTGACTCAAAGAGCCAATCTCAAAAACTCATATCAGTAACATCAACACATGGTTTCATTTGAAATAATGAGTTATACATGAGGCAGCAGTAGCCACTCGGAGTTGAATCCATTGAATCGGGCCACTCTGGACACCCTTGCGAGAGTTTCTGGCGTTTCCTCTTTGTGTTTGTACCCCCATGCCCAACTTGCTCGTGTTTCCTTCCTGTGCACACGCTCCGTCCCCAGGATCACACGGGACATATCTGGTTTCATCTCAGAACAGTGCTCATTGTTCCCTACAATGATATGTATCAATACGACAAAACAGTATGTCTGTTGTATTTCCTCATGACCTGGGATTATCTCCTGGTTATCAGGTGTATTTTATTAAGATGCTGGATGAGGCGGGCTGGCTGAGTCGGTCCGAGTGCTACCACGGGATAGGGGGACGGGGTGCCCAGTCGCTCACTGGCTGTTCTTTGGCCAATacaaagagagggacagagagagtgtgaggagtGTAAACGACGACGACTGACAGAAGATGGTGCTCCTGACTGCCAAAATCATGGCAGAGAACTGCGCTCTTTGTCACAGTCGGGGGTCTGGTCACTACTCTTGTAACCACCTTCATCCCCCTGTGGAAGACCTTGAACTCGGACCTGAACTAAGCGGAGAACTAGTAGTAAGGCCTGTGGCACACCTGCATCTTCACAGAGGAGGTTGGGATATAGCCTTTGAATCCCTCATGGCCCTGCCTGTGGACTTGCTGGCCTCCATGGTGCTCATGCTGTTGTCAGGGCACTAGGGCCCTGACCATGGTGGTGACCTTCCCAGGCCTGAAGGGAGTGGAGCTGGGCTCTCTGGAAGCAGCAGGGTTTGAAGAGGGCCTCCTCATTGTCAGCGGTGTGCTGTCCTGGGTGTCGGGGCTCACCACCCTGGCCCGTCTCCCTGGTGGCCTACATGACTGTGGTAGAGTTCTGGGACGAGAACCTGGCCGACGTGGTTTCATGCTGGGAGTTTGGAGAGGCCATGTTCTCTGGCTGGTTCTCGGGCCTCTTCCTGGTCATTGGAGGCTCCCTCTTCTTTGTGGCTGTGTACATGGCAGACCACAACCTGCAGCAGTGAGTGGCCAGCCTCCCAAACACCCCCCAGGAGAAGCCAAGGGGACAGTACTACTTAAAGACAGGTTTTATAGTCAAACTTTCGGTTGATCAAGTTATCTTTATTGTCCCAATTGGGAAATTTACAGTCGGGGttcaacaataaaaaataaaaataaaaacagtgacaACCATACAACCGATATAAACATAACATGAAACAATGAGATGGATAAAAAGGAGTAATAATTGTGCAAAAGTGCAGCAATAGAGAGACATTTCATGTGCAGATTCAGAAAGTTAATGGCCTGTGGGATAAAATAGTTATTGTATATGTTGCTATTGAATTTGGGAAGTCTGAAGGGAGAAGCGCAAAATGGTCAAGGTGGGGGTGACCAGGACAGTCTAGGATACTGTTAGTTCTCCTCACCATTCGCTTTCTGAACGCCACTGAGCTGTGCCTGTTGCATCCCAATGAAATTGCTGCCCACTTTAACCACCCCGTACAACTTATTTCTGTTGCAAACATTGATTGCCAAACCAGGCCACCTTTGAGAACATCAATACGGATTCAATAAAACAGTGTCatcattgtcttgctgacgttAAAAGAGTTAATCTCAGATGGTATGTGTTCTCCTCAAACGTCAACTTGTTGTCCAGCACTGTTCCCAGGTACTTGTAGATACTGACCAGCTCAATGTCATGTCCCATGACCACAGTGGGTGTGGGGTTCAGTGGCGGCCTTCTAAAGTCAATGGCCATATCTTTAGTTTGGAAGACATTCAGTTGGAGGAAGCAGTTTTCAAACCATGACGCGAAGTCATCTACCACAGGCCCATGTTCAGACTCTCCATCCTGTAGGAGACTGACGACGACAGAGTCATCTACCACAGGCCCATGCTCAGACTCTCCATCCTGTAGGAGACTGACGATGACAGTCATCTACCACAGGCCCATGCTCAGACTCTCCATCCTGTAGGAGACTGACGACGACAGAGTCATCTACCACAGGCCCATGCTCAGAATCTCCATCCTGTAGTAGACTGACGATGACAGAGTCATCTACCACAGGCCCATGCTGCAGACTCTCCATCCTGTAGTAGACTGACGATGACAGAGTCATCTACCACAGGCCCATGCTGCAGACTCTCCATCCTGTAGTAGACTGACGATGACAGAGTCATCTACCACAAGCCCATGCTGCAGACTCTCCATCCTGTAGGAGACTGACGATGACAGAGTCATCTACCACAGGCTCATGCTTCAGACTCTCCATCCTGTAGTAGACTGACGACGAcagtcatcagcaaacttgatgatgtgCCTGTTTTCATATTCGCTACGACAGTCGTtagtgtatagtatgtataggagaggagagaagacacaaCCTTACCAAACGGTGGAGGAGCAGAGCTGCTTTGACATGACGCCATTTAATCACACTTGTTGGGACTGGTCGGTAAGGAAGTCCACTATCCAGCCCACAAGGCTCACATCCAGCTTGATGTGGGAGGAGCTTCTCTGCTAGTATGTGAAGCTGGATAGTATTGAAGGGAGACGAGAAGTCCATGAACAGAAGCCTCAAGTGGGGGTTTTCGGCCCTCCAGGTGCTTGTAGAGGAAGTTGAGTAGGGTTAGAGTGTGGTCCTCCATCCCTCGCTTGGCCCTGTAAGCAAACTGCAGGGGGTTCAGGGAATACTCAAGAGTTTAGGCACCTTCTGCAGCTTGAGTGAAAATGTGATGAAAAAATCTACTGAGTTGTTCTGCACATGACTTAAGTTCCTGTCCACCAATGTCTGGTCCTGGGCTCTTTTTTTAAACTTTGGTCTGTCTGAATAGGCTGGTGACACTGGATGCAAAATTCAATTTTGGGAGTAGCAATTGTCCTCATACGCATCTGAGTAATTCCTCCACTAACGTTCTGATTGTCAGATCTGAGATAAAACCATTTAGCTCATCAGCCAGTCCTTTGTGTTTAAACGGTATCATCTTGTTTCCCTTGTCTTGTAGCCCAACCACAGTTCTCATTCCATTCCAGGCAGCTCTCAGATTGTTGCTACTCCAGATAGCTTTTATTGGTCCAAACCTTCACTTACCGCTTTTGCGCTCTCTCACTCTTCAGCACAGTCCTGTAGAGAGGCAGAAGTTGCActgtgttgtggtcagatgagctCTCGCTTTTGCCCTTTCTCACTCTTCAGCCCAGTCCTGTAGAGAGGCAGAAGATGCActgtgttgtggtcagatgagctCTCGCTTTTGCCCTTTCTCACTCTTCAGCCCAGTCCTGTAGAGAGGCAGAAGTTGCActgtgttgtggtcagatgagctCTCGCTTTTGCCCTTTCTCACTCTTCAGCCCAGTCCTGTAGAGAGGCAGAAGATGCActgtgttgtggtcagatgaacTCTCGCTGTAGACTTGTAGGCCCCTCTGATGGAGCCATAACATAGGTTCAGGGTCTTGTTGAGGTGTGTTGGGAAGGTGACATATTAATCTGTGTTATTCTGAGTTTTCTTCATGTTACAGCGATTTAAAATGTCCTAAAAGAATATTGGGGGCATCAGGAGACAGAGGTTGCATTTTGTGTCACAGTATAAATAAGATTAGCAACATTCTTCGCATTGGCATTACGGTGAATGTAAACGACCATTATAAATATTTGGGGAAACTCTCTTGGGAGATAGAAAGGCGACAGCAGCTCAATATCAGGTAGACATAGTCTCGCAGGACAGTTACATTGTTGCACCATCGGTGATCTATGCACAAGCAGACTCTGCCCCCGTGATTTCCCAGTCGAACTGCTGTCCCCATCCAGTCGGAACAGACACCCGAATCATTTTATCTCCAAAGACGAGTCAGTCAGCCAAGACTCATTAAAAGCCATAAAACAGGTGCCTCTGCTCTCCTGAAGATGATTGACCTTTGCCTGCAACTCGTCTATTTTATTCCTCAAGGATTGCACATTCGCCAGGATAATATAAGGTAAGGGGATGCGTAGCCTGCTGCTGATGTTTAATCCGTAATCGAACGCCACCTCTCCTCCCCCGTTTGCGAACATGGCCATCCTTTCCACGGTTCAGAGCATTAAATCTATTCATCGATTGCCAACACTTTCATGTGTTTCAGAAGAGAGTCCACAGACTTGTTAAGGGGTTTATCCACCGAAGCCGGGCGATCCCATTGCAGCAGGAACTCCAGTGGTGATGTGGAGGAGCTGAGGTCTACGATGGCTGGCCTGGACCTACACCTGCACGTGCTGATACCCCCATTTCAACGTTGTCATCGTTACCTCCCAACCCAGCAACCCAACCCCAGGATCTgac

Function

NR:

description
PREDICTED: putative claudin-24

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110535750 True 6588 mRNA 0.46 2 46031189 46067844
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110535747 LOC106580117 coding downstream 40767 45973055 ~ 45990422 (-)
gstt2 LOC106580120 coding downstream 62002 45966597 ~ 45969187 (-)
entr1 LOC106580119 coding downstream 73489 45952865 ~ 45957700 (-)
LOC110535744 LOC106580121 coding downstream 88783 45923474 ~ 45942406 (-)
LOC110535743 card9 coding downstream 108902 45916594 ~ 45922287 (-)
lztr1 lztr1 coding upstream 147 46067991 ~ 46080755 (-)
gal3st1a LOC106580113 coding upstream 17610 46085454 ~ 46105808 (-)
pes pesc coding upstream 40063 46107907 ~ 46126485 (-)
pole pole coding upstream 67782 46135626 ~ 46172608 (-)
LOC110535758 foxn4 coding upstream 137645 46202709 ~ 46223082 (-)
G984809 NA non-coding downstream 18464 46010752 ~ 46012725 (-)
G984742 NA non-coding downstream 160966 45870010 ~ 45870223 (-)
G984737 NA non-coding downstream 164439 45865112 ~ 45866750 (-)
G984602 NA non-coding downstream 331616 45687016 ~ 45699573 (-)
G984181 NA non-coding downstream 407162 45623339 ~ 45624027 (-)
G984856 NA non-coding upstream 55001 46122845 ~ 46124545 (-)
G984858 NA non-coding upstream 59582 46127426 ~ 46127647 (-)
G984859 LOC106580269 non-coding upstream 60157 46128001 ~ 46133058 (-)
G984893 NA non-coding upstream 126339 46194183 ~ 46194733 (-)
G984166 LOC106580127 other downstream 424772 45605724 ~ 45606417 (-)
G983486 NA other downstream 930970 45099488 ~ 45100219 (-)
G982818 LOC106613263 other downstream 1421247 44609409 ~ 44609942 (-)
LOC110535714 LOC106580145 other downstream 3395127 42631822 ~ 42836577 (-)
kiaa0825 kiaa0825 other downstream 3439421 42425475 ~ 42591782 (-)
G985191 fam222a other upstream 471689 46539533 ~ 46541987 (-)
gltpa gltp other upstream 524512 46592176 ~ 46602166 (-)
G985626 NA other upstream 578484 46646328 ~ 46646949 (-)
G985699 LOC106613263 other upstream 726775 46793282 ~ 46801092 (-)

Expression

LOC110535750(LOC105014428) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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LOC110535750(LOC105014428) Expression in each Bioproject

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LOC110535750(LOC105014428) Expression in each Sample
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Co-expression Network