Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC100135853 |
| gene name | LOC106580045 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 49364850 ~ 49443064 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021621130.2 | False | 5015 | mRNA | 0.40 | 4 | 49364850 | 49374176 |
| TU1125306 | True | 1084 | lncRNA | 0.35 | 2 | 49364850 | 49443064 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535815 | LOC106580049 | coding | downstream | 109239 | 49246900 ~ 49255611 (-) |
| LOC110535812 | LOC106580051 | coding | downstream | 418097 | 48846439 ~ 48946753 (-) |
| LOC118937449 | NA | coding | downstream | 519396 | 48832634 ~ 48845454 (-) |
| ela3l | LOC106580263 | coding | downstream | 683559 | 48676558 ~ 48681291 (-) |
| fam219ab | ci025 | coding | downstream | 700577 | 48651780 ~ 48664273 (-) |
| LOC110535820 | LOC106580043 | coding | upstream | 2108 | 49376284 ~ 49384996 (-) |
| LOC110535824 | LOC106580039 | coding | upstream | 88516 | 49462692 ~ 49478969 (-) |
| emb | emb | coding | upstream | 120651 | 49494827 ~ 49508190 (-) |
| LOC110535829 | LOC106580032 | coding | upstream | 157445 | 49531621 ~ 49554496 (-) |
| mboat4 | mboat4 | coding | upstream | 188169 | 49562345 ~ 49564429 (-) |
| G988612 | NA | non-coding | downstream | 26700 | 49337509 ~ 49338150 (-) |
| G988603 | cssa20h9orf84 | non-coding | downstream | 47660 | 49315838 ~ 49317190 (-) |
| G988591 | NA | non-coding | downstream | 58548 | 49305547 ~ 49306302 (-) |
| G988353 | NA | non-coding | downstream | 108260 | 49256338 ~ 49256590 (-) |
| G988350 | NA | non-coding | downstream | 118574 | 49246068 ~ 49246276 (-) |
| G988652 | LOC100136247 | non-coding | upstream | 46969 | 49421145 ~ 49423391 (-) |
| G988672 | NA | non-coding | upstream | 75392 | 49449568 ~ 49450039 (-) |
| G988688 | NA | non-coding | upstream | 85199 | 49459375 ~ 49459716 (-) |
| G988689 | NA | non-coding | upstream | 86331 | 49460507 ~ 49460775 (-) |
| G988690 | NA | non-coding | upstream | 86757 | 49460933 ~ 49461185 (-) |
| G987496 | NA | other | downstream | 765440 | 48598493 ~ 48599410 (-) |
| G985835 | NA | other | downstream | 2304187 | 47059383 ~ 47060663 (-) |
| G985699 | LOC106613263 | other | downstream | 2563758 | 46793282 ~ 46801092 (-) |
| G985626 | NA | other | downstream | 2717901 | 46646328 ~ 46646949 (-) |
| gltpa | gltp | other | downstream | 2762684 | 46592176 ~ 46602166 (-) |
| G988700 | NA | other | upstream | 135052 | 49509228 ~ 49511433 (-) |
| LOC110535846 | LOC106580019 | other | upstream | 530553 | 49904325 ~ 49909935 (-) |
| G989341 | NA | other | upstream | 746400 | 50120576 ~ 50121816 (-) |
| G989343 | NA | other | upstream | 757153 | 50131329 ~ 50132173 (-) |
| G989880 | LOC106579995 | other | upstream | 1249254 | 50623430 ~ 50624105 (-) |
| LOC110535834 | LOC106580030 | coding | upstream | 167865 | 49610929 ~ 49620127 (-) |
| G988695 | NA | non-coding | upstream | 46657 | 49489721 ~ 49489990 (-) |
