XLOC_002841 (BX005332.1)


Basic Information

Item Value
gene id XLOC_002841
gene name BX005332.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 29128202 ~ 29138004 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005269
ctctctctccctccctctctctctttttctaacTCCCCCTTTTTCTCCAAAGCGACTCTCCTCTAGGTTCTCGCCTCCCCCTACTGGGTTTAAAAGGCTTGTAGGAAAATGGCGGGTCTGTTTCCTCTTTTCAGAGGATCCTCCCAAGATTTACATGGACGTTGGGCTGGGGCGACAAACACACGCGGATCTCCGTGTCCTTGCGCACAAACTTCAAGAGCATCTGGAGTCTGGACAGCAGCATCAGTTTGAGCACAGGAAAACAGTTAGGAGGAAACTAAGCTGGCTGCCGTGACAGACAACACAATCTGGAGAGAAGAGAAAAGGCATTTTCATGTGCGCTGTATTCCACACAGAGGCCAGACACCCGTCACTGACACACTCCTGCTTCTTCACACTCCTGCTTTTCACCTGCCCCCATGACACAGGATTAGAACAAATGCTGCTATCCGGgctcatgcttttattttggagtcagtcagtcagtcagtctgtctgtccgtccgtccgtctgtccgtccatccatccatctagtatAAACActtattatttatagttatttaacagtttctgtattttgtgattcacacgTGTTTTCCATTTAATTacggttgtaaattgcattatgagaccttgatctctgctcttttGTCTTCTGATGTTGATAATTCAACTCTTCAGATTAACAAAGTgagttttattgacattttagtagttttaaatatCATAAGAACAActatataaagaaataagtctgtaaaatgcactggtagtttattacaaggtttttgtaccacaTACAACATCAACCTAgataactttaaaatattaataaatgtccttttttttccagactttcaaggttaaaagtaaAGACTAAGGTCCCATTAAAGcttaaataaatggggaaaaaaacatgaatcacaaaatacggaaaacagcaaatttacagatttttttaaaaagtatatctATCtataatcatgaaaaaaaaacacgaaaATGCTTTGTGTTGCAACAAAAGCATAGAGCCTCATCAGGCTAAATGAGAATTGATCAAATGTCTtcaaaaaacaaagttaaaaacaaatgtaagaaagattagttagttatttagttgGGAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098042

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005269 True 1125 lncRNA 0.39 3 29128202 29138004

Neighbor

gene id symbol gene type direction distance location
XLOC_002840 zpld1a coding downstream 7667 29112756 ~ 29120535 (-)
XLOC_002839 si:ch211-103f14.3 coding downstream 26353 29087810 ~ 29101849 (-)
XLOC_002838 BX537347.1 coding downstream 204569 28923517 ~ 28923633 (-)
XLOC_002837 BX537347.2 coding downstream 205951 28922135 ~ 28922251 (-)
XLOC_002836 alcama coding downstream 292390 28731749 ~ 28835812 (-)
XLOC_002842 ccdc83 coding upstream 88176 29226180 ~ 29236860 (-)
XLOC_002843 NA coding upstream 128266 29266270 ~ 29491087 (-)
XLOC_002844 tmem126a coding upstream 131994 29269998 ~ 29272757 (-)
XLOC_002845 CU861448.1 coding upstream 570064 29708068 ~ 29708182 (-)
XLOC_002846 si:ch73-261i21.2 coding upstream 593056 29731060 ~ 29733194 (-)
XLOC_002834 NA non-coding downstream 663176 28460213 ~ 28465026 (-)
XLOC_002833 CR392341.3 non-coding downstream 673031 28454500 ~ 28455171 (-)
XLOC_002832 CR392341.2 non-coding downstream 679334 28447906 ~ 28448868 (-)
XLOC_002854 CT737197.1 non-coding upstream 1393139 30531143 ~ 30531257 (-)
XLOC_002858 NA non-coding upstream 2124848 31262852 ~ 31295006 (-)
XLOC_002862 NA non-coding upstream 2939807 32077811 ~ 32084624 (-)

Expression


Co-expression Network